| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0031 |
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| Symbol | |
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| ID | 6459278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 34374 |
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| End bp | 36110 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642724023 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_002014744 |
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| Protein GI | 194332884 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.43195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAG AATCAAATCC GATTCTCGAT TTTGCGACGG ACTATGTCTT TCCCGGGTTC
AGTGAACAGA CGGGAGCCGA TAAGATCGTT GCGTTCGGGG ATCACAGTCA CAAATGTCCG
ATCTATGTCC GCCAGACACC ACCCTGCTCG GCTGAATGCC CGGCAGGCGA AGATATCCGG
GGGATCAATC GCTATCTGAA CGGGACGACC CCGTCGGACG ATCCGATGCG TTCGGCCTGG
GAGACGGCTG TCGACAGGAA CCCTTTTCCT GCTGTCATGG GACGAATCTG TCCGCACCCC
TGTCAGAGCG GATGTAATCG GGGTTTCCAT GACGAGAGCG TTGCCATCAA TGCCGTGGAG
CATGCTATCG GCAACTACGC TATAGAAGCC GGTCTGCCGC TTCCCGGTCC CGGTCCCGAT
ACCGGAAAGC GGGTCGCTGT GATCGGCGGA GGTCCTGCCG GTCTGTCGGC TGCTTACCAG
CTTCGCAGAA AAGGTCATGC GGTGACGATC TACGATGCCA ACAGCAAGCT TGGCGGGATG
GTGCTTTACG GCATTATGGG ATACAGGGTT GACCGCAGGG TCCTCGAAAC TGAAATTCAG
CGCATCATCG ATCTGGGCGT CGAGACGAAG ATGGGCGTTC GTGTCGGGCG CGATGTGACC
CTCGAGCAGC TTGAAGCGCA GTATGACGCA GTTTTTCTCG GCGTGGGGGC GCAGGTCGGC
CGTGATCTTC CGGTTCCGGG TTTTGAGGGG ACTGCCGGAG TGACGAACGC TATCGACTTC
CTGCGCAACT ACGAGGTATT GGGGGATGAT ATGCCGGTAG GGCGACGTGT CGTCGTTATC
GGCGACGGTA ACGTCGCCAT GGATGTTGCA AGACTTGCTT TGAGGCTTGG TTCCGAGGCT
GCCGTGGTTT CGGGTGTGCC GCGCGAGGAG ATGGCCTGTT TTGACAACGA GTTTGACGAT
GCTCTGCGCG AAGGGACACG CATGTACTTT CAGACAGGGA CGCTCGAGGT GCTTTCCGGG
CCAGATGGGG TTAGCGGTTT ACGCTGCTCG TCGATGACAG GAAAAGAGAA GGGCGAGGAT
GGCTGGAATT CACCGATTCC GTTCCTTCGC TACAAGAGCT GTGGCGAGCC GTTCGACATC
GAAGCCGATA TGGTTGTTGC CGCGATTGGA CAGGCCACCG ATATGCAGGG CCTTGAGGAT
GTTGTCAACG GTGCGCCATG GCTCAGGGTC GATCGCAATT TCCGTATTGC AGGACGGGAA
AAGCTCTTTG GCGGCGGTGA TGCCCTCAAG GTTGATCTTA TCACGACTGC TGTCGGGCAT
GGCCGAAAGG CGGCTATGTC GATCGATGCA TTTCTCAATG GAGAACCGAT GCCTGAGCAT
CCATACCGCG AGGTGACCAA GGTTCAGAAG CAGGATGTGC TCTATTTCCT TCCTGTGCCG
CAGGCAAAGC GCACGAGTCT TGAGCCTGTC GACGTTGTCG GCAACCATGA CGAGCTGTTG
CAGCCGCTTT CTCCTGACGA GACCAGGGCC GAGTCTGAGC GCTGTATGAG CTGCGGACTC
TGCTTCGACT GCAAACAGTG CGTCTCTTTC TGCCCGCAGG AGGCCATATC ACGCTTCCGC
GACAATCCTG AGGGAGAGAA GGTCTATACC AATTATGCAA AATGTGTCGG TTGTCATCTC
TGCTCACTTG TCTGCCCTTC CGGCTATATC CAGATGGGTA TGGGAGATGG TCTATGA
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| Protein sequence | MKAESNPILD FATDYVFPGF SEQTGADKIV AFGDHSHKCP IYVRQTPPCS AECPAGEDIR
GINRYLNGTT PSDDPMRSAW ETAVDRNPFP AVMGRICPHP CQSGCNRGFH DESVAINAVE
HAIGNYAIEA GLPLPGPGPD TGKRVAVIGG GPAGLSAAYQ LRRKGHAVTI YDANSKLGGM
VLYGIMGYRV DRRVLETEIQ RIIDLGVETK MGVRVGRDVT LEQLEAQYDA VFLGVGAQVG
RDLPVPGFEG TAGVTNAIDF LRNYEVLGDD MPVGRRVVVI GDGNVAMDVA RLALRLGSEA
AVVSGVPREE MACFDNEFDD ALREGTRMYF QTGTLEVLSG PDGVSGLRCS SMTGKEKGED
GWNSPIPFLR YKSCGEPFDI EADMVVAAIG QATDMQGLED VVNGAPWLRV DRNFRIAGRE
KLFGGGDALK VDLITTAVGH GRKAAMSIDA FLNGEPMPEH PYREVTKVQK QDVLYFLPVP
QAKRTSLEPV DVVGNHDELL QPLSPDETRA ESERCMSCGL CFDCKQCVSF CPQEAISRFR
DNPEGEKVYT NYAKCVGCHL CSLVCPSGYI QMGMGDGL
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