| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1954 |
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| Symbol | |
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| ID | 3746714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2482256 |
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| End bp | 2483995 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637774489 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_380245 |
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| Protein GI | 78189907 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.151886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAG AATCAAATCC AATCCTTGAT TTTGCAATAA ACTACCAGTT TCCTCCTTTT
GAGGAGCTTA CTGGTACTCA TAAAATTGTT GCATTTGGGG ATCACAGTCA TAAGTGTCCT
GTCTATGTTC GGCAAACTCC GCCTTGTCAG GCAGAGTGCC CAGCAGGTGA AAATATTCGT
GGCTACCATC GTTTTTTGAA TGGTATTGAT AAATCGGAAG ATGAATGGAA ATCAGCATGG
GAAACCTTAG TTGAAATAAA TCCATTTCCG GCGGTAATGG GGAGAATTTG CCCCCATCCA
TGCCAAAGCG CATGTAACCG TCAATATCAC GACGAAAGTG TGGCTATTAA CGCCGTTGAG
CAAGCAATAG GCAATTACGG CATTCAAGCA GGCTTGCAGC TTCCCGAACC AGCGCCAGCA
ACGGGCAAAC GTGTTGCCGT CATTGGTGGT GGTCCAGCAG GTTTATCGTG CGCCTATCAA
TTACGGCGTC GTGGACATGC TGTTACGCTG TACGATGCTA ATGAAAAGCT TGGTGGAATG
GTGCTTTACG GTATTATGGG CTACCGTGTT GACCGTAAAG TACTTGAAGC TGAAATCCAA
CGCATCATTA ACCTTGGTAT TGAAACCAAG ATGGGTGTTC GTGTTGGTAG CGATGTAACA
CTTGATGAGC TTGAGCAAGA GTTCGATGCC GTTTTTATTG GTATTGGTGC TCAAGCAGGT
CGTTCATTAC CTGTAGCTGG TGCAGCGGAA ACTCAGGGAG TTACCAATGC TATTGAGTTT
CTTAGAAGCT ATGAGGTAGA GGGCGATAAC ATTACCATTG GTAAAAAAGT ACTTGTTATT
GGCGATGGTA ACGTTGCTAT GGACGTTGCT CGCCTTGCTT TGCGTCTTGG TTCAGAAGCG
GCTGTTGTTG CTGGTGTGCC TCGCGAAGAG ATGGCTTGTT TTAAAGAAGA GTTTGACGAT
GCCGATCACG AAGGTGCTGT TATGCACTTT ATGAGCGGAG CGCTTGAACT GCTAAAAAAT
GATGATGGTT CTGTTCGTGG GTTGCGTTGT GCTAAAATGG TGAAAAAAGC CAAAGGCGAA
GAGGGATGGA ATTCACCAAT TCCATTCTTC CGCTATAAAA ACAGCGATGA AACCTTTGAC
ATTGAAGCCG ACACTGTGGT TGCTGCCATT GGGCAAACAA CCAACATGCA AGGCTTTGAA
GCCATTACCA ATGGAGCGCC TTGGTTGAAA GTTGATCGCT CATTCCGCAT TCCGGGACGC
GAAAAACTCT TTGGTGGTGG TGATGCCCTT AAGGTTGATC TTATCACTAC TGCTGTTGGG
CATGGACGTA AAGCCGCAGA GGCTATTGAT GCCTTCTTAA AAGGTGAGCC AATGCCCGAT
CAAGGTTACC GTGAAGTTAC GAAGGTGAGC CGTCAGGATG TTCTTTACTT CCCTGTTACG
CCGCCAGCAA AGCGCGATAC CATTAAAATT CAAGAGGTTG TTGGCAACCA CGATGAATTG
TTAGTTGCCT TAACGCCTGA GCAAGCAAAA GCTGAGTCGG GTCGCTGCAT GAGCTGCGGC
TTGTGCTTTG ATTGTAAGCA GTGTGTTTCG TTCTGCCCGC AAGAAGCAAT TTCTCGCTTC
CGCGATAATC CTGTAGGCGA AGTAGTTTAT ACCAATTACG ATAAGTGTGT TGGTTGCCAC
CTCTGCTCGT TAGTGTGTCC TTCGGGCTAC ATACAAATGG GTATGGGTGA TGGCTTATAG
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| Protein sequence | MKVESNPILD FAINYQFPPF EELTGTHKIV AFGDHSHKCP VYVRQTPPCQ AECPAGENIR
GYHRFLNGID KSEDEWKSAW ETLVEINPFP AVMGRICPHP CQSACNRQYH DESVAINAVE
QAIGNYGIQA GLQLPEPAPA TGKRVAVIGG GPAGLSCAYQ LRRRGHAVTL YDANEKLGGM
VLYGIMGYRV DRKVLEAEIQ RIINLGIETK MGVRVGSDVT LDELEQEFDA VFIGIGAQAG
RSLPVAGAAE TQGVTNAIEF LRSYEVEGDN ITIGKKVLVI GDGNVAMDVA RLALRLGSEA
AVVAGVPREE MACFKEEFDD ADHEGAVMHF MSGALELLKN DDGSVRGLRC AKMVKKAKGE
EGWNSPIPFF RYKNSDETFD IEADTVVAAI GQTTNMQGFE AITNGAPWLK VDRSFRIPGR
EKLFGGGDAL KVDLITTAVG HGRKAAEAID AFLKGEPMPD QGYREVTKVS RQDVLYFPVT
PPAKRDTIKI QEVVGNHDEL LVALTPEQAK AESGRCMSCG LCFDCKQCVS FCPQEAISRF
RDNPVGEVVY TNYDKCVGCH LCSLVCPSGY IQMGMGDGL
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