11 homologs were found in PanDaTox collection
for query gene HMPREF0424_0761 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_0761  CRISPR system CASCADE complex protein CasB  100 
 
 		 204 aa  417  1e-116  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0427302 
 
 
-
 
NC_013235  Namu_3053  CRISPR-associated protein, Cse2 family  29.41 
 
 		 215 aa  65.9  0.0000000004  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00308691  hitchhiker  0.00180541 
 
 
-
 
NC_009953  Sare_2574  CRISPR-associated Cse2 family protein  30.17 
 
 		 226 aa  59.7  0.00000003  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00326994 
 
 
-
 
NC_013124  Afer_0987  CRISPR-associated protein, Cse2 family  27.59 
 
 		 190 aa  57  0.0000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
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NC_013131  Caci_3908  CRISPR-associated protein, Cse2 family  23.23 
 
 		 223 aa  55.8  0.0000005  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.0000211783  normal  0.232688 
 
 
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NC_014165  Tbis_1534  Cse2 family CRISPR-associated protein  27 
 
 		 220 aa  52  0.000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.347836  normal  1 
 
 
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NC_007777  Francci3_0019  hypothetical protein  28.74 
 
 		 206 aa  49.3  0.00004  Frankia sp. CcI3  Bacteria  normal  0.570283  normal  1 
 
 
-
 
NC_014212  Mesil_1231  CRISPR-associated protein, Cse2 family  28.02 
 
 		 199 aa  49.3  0.00004  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.00000156485  normal  0.260755 
 
 
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NC_007333  Tfu_1599  CRISPR-associated Cse2 family protein  24.16 
 
 		 214 aa  48.1  0.00008  Thermobifida fusca YX  Bacteria  normal  0.0275986  n/a   
 
 
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NC_008010  Dgeo_2631  hypothetical protein  27.68 
 
 		 204 aa  48.1  0.00009  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.930779  n/a   
 
 
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NC_013510  Tcur_2681  CRISPR-associated protein, Cse2 family  25.56 
 
 		 212 aa  43.5  0.002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000660236  n/a   
 
 
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