Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2574 |
Symbol | |
ID | 5706146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2931332 |
End bp | 2932012 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272037 |
Product | CRISPR-associated Cse2 family protein |
Protein accession | YP_001537407 |
Protein GI | 159038154 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00326994 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGTCA CAGCCCCCGC CGACACCGGC AGCCCCGCTG TCGGCCATCC CCATCGCCGA GGCACCTTCG GCGGGTTCGT CGCCGCGAAA GTCGCCGGAT TGCAGGACGG CTACCTCAGG GAATCCAGCT ACGCCGTGGC CGTACTGGCC CGGCTGCGTC GTGCGGTCGG CCGGGAGCCA GCCGCCGATT TCACGATCCT CGAGCAGACG CGGGTGGCCG AAGAGTACCT GGAACACAGG TGGCACAGCG ACGACGAGGT GACCCACACC GAGCAGGCCA TGCACAGCGC GCTCACCCTC TACGCGGTGC ACCAGCAGTC AATCCGCGAC CTACCCATGC ACCGCGACGG CATCGGCCTC GGTGCGGCGG TCGCCCTCCT GGCCCAGCAG GCCACCAGCC CCGATGCCGT ACACCGGCGA TTCGCCGCCC TCGGCACCGC CACCACCTAC GCCTCCGTCA CCACCCACCT GCGCAGCCTG GTCCGGCTCC TGCGGGACAC GCGGATACCC CTCGACTACG GGGTGCTGGC CGAGGACTTG GTCACTCTGC AGAAGCCGTG GGGGCCCACC CAGGTCCGCG GCCGGTGGGG CCGCGACTTC TACCGCCAGC CCGATACCAG GAACCGCCAC CAGGCGGGCA CCACCGACTC CATGCCCGAC CAGACCACTT CCGAGGAGTG A
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Protein sequence | MTVTAPADTG SPAVGHPHRR GTFGGFVAAK VAGLQDGYLR ESSYAVAVLA RLRRAVGREP AADFTILEQT RVAEEYLEHR WHSDDEVTHT EQAMHSALTL YAVHQQSIRD LPMHRDGIGL GAAVALLAQQ ATSPDAVHRR FAALGTATTY ASVTTHLRSL VRLLRDTRIP LDYGVLAEDL VTLQKPWGPT QVRGRWGRDF YRQPDTRNRH QAGTTDSMPD QTTSEE
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