5 homologs were found in PanDaTox collection
for query gene HMPREF0424_0083 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_0083  DNA mismatch repair enzyme MutH  100 
 
 
482 aa  1004    Gardnerella vaginalis 409-05  Bacteria  n/a    unclonable  0.00000000253451 
 
 
-
 
NC_010816  BLD_1358  DNA mismatch repair protein  48.65 
 
 
502 aa  475  1e-133  Bifidobacterium longum DJO10A  Bacteria  unclonable  0.0000249397  n/a   
 
 
-
 
NC_008261  CPF_1016  putative type II restriction endonuclease  32.41 
 
 
495 aa  209  1e-52  Clostridium perfringens ATCC 13124  Bacteria  unclonable  0.000000561814  n/a   
 
 
-
 
NC_007575  Suden_1854  DNA mismatch repair enzyme MutH  31.02 
 
 
467 aa  179  9e-44  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_006055  Mfl307  type II restriction enzyme Sau3AI, GATC site  29.5 
 
 
452 aa  103  5e-21  Mesoplasma florum L1  Bacteria  hitchhiker  0.00000109234  n/a   
 
 
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