9 homologs were found in PanDaTox collection
for query gene Suden_1854 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_1854  DNA mismatch repair enzyme MutH  100 
 
 
467 aa  944    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1016  putative type II restriction endonuclease  40 
 
 
495 aa  278  1e-73  Clostridium perfringens ATCC 13124  Bacteria  unclonable  0.000000561814  n/a   
 
 
-
 
NC_010816  BLD_1358  DNA mismatch repair protein  34.28 
 
 
502 aa  199  7e-50  Bifidobacterium longum DJO10A  Bacteria  unclonable  0.0000249397  n/a   
 
 
-
 
NC_013721  HMPREF0424_0083  DNA mismatch repair enzyme MutH  30.82 
 
 
482 aa  187  4e-46  Gardnerella vaginalis 409-05  Bacteria  n/a    unclonable  0.00000000253451 
 
 
-
 
NC_006055  Mfl307  type II restriction enzyme Sau3AI, GATC site  38.03 
 
 
452 aa  120  3.9999999999999996e-26  Mesoplasma florum L1  Bacteria  hitchhiker  0.00000109234  n/a   
 
 
-
 
NC_009831  Ssed_1131  DNA mismatch repair protein  25.95 
 
 
224 aa  50.8  0.00005  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000941126  normal 
 
 
-
 
NC_008709  Ping_0501  DNA mismatch repair protein  22.95 
 
 
224 aa  46.6  0.001  Psychromonas ingrahamii 37  Bacteria  normal  0.56276  normal  0.0450922 
 
 
-
 
NC_003910  CPS_3626  DNA mismatch repair protein  23.46 
 
 
222 aa  45.8  0.002  Colwellia psychrerythraea 34H  Bacteria  normal  0.544284  n/a   
 
 
-
 
NC_010506  Swoo_1226  DNA mismatch repair protein  26.49 
 
 
231 aa  43.9  0.006  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000502045  hitchhiker  0.00825632 
 
 
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