22 homologs were found in PanDaTox collection
for query gene Gura_0406 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_0406  caa(3)-type oxidase, subunit IV  100 
 
 
87 aa  170  6.999999999999999e-42  Geobacter uraniireducens Rf4  Bacteria  normal  0.823665  n/a   
 
 
-
 
NC_013173  Dbac_1539  caa(3)-type oxidase, subunit IV  47.44 
 
 
98 aa  67  0.00000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0534  caa(3)-type oxidase, subunit IV  42.17 
 
 
96 aa  59.7  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.15954 
 
 
-
 
NC_007498  Pcar_2528  caa3-type cytochrome c oxidase, subunit IV  41.86 
 
 
94 aa  57.8  0.00000005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0456558  n/a   
 
 
-
 
NC_011146  Gbem_0045  caa(3)-type oxidase, subunit IV  42.35 
 
 
93 aa  57.4  0.00000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.602814  n/a   
 
 
-
 
NC_007519  Dde_1825  Caa(3)-type oxidase, subunit IV  43.55 
 
 
94 aa  57  0.00000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.183127  n/a   
 
 
-
 
NC_011891  A2cp1_0858  caa(3)-type oxidase, subunit IV  48.81 
 
 
130 aa  53.9  0.0000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0854  caa(3)-type oxidase, subunit IV  48.81 
 
 
130 aa  53.9  0.0000008  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0251  Caa(3)-type oxidase, subunit IV  41.18 
 
 
98 aa  53.1  0.000001  Geobacter metallireducens GS-15  Bacteria  normal  0.138243  normal  0.0191554 
 
 
-
 
NC_007760  Adeh_0806  Caa(3)-type oxidase, subunit IV  47.62 
 
 
131 aa  53.1  0.000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0044  caa(3)-type oxidase, subunit IV  43.59 
 
 
95 aa  52.4  0.000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000561945 
 
 
-
 
NC_007760  Adeh_2272  Caa(3)-type oxidase, subunit IV  46.48 
 
 
129 aa  49.7  0.00001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.205839  n/a   
 
 
-
 
NC_002939  GSU0221  cytochrome c oxidase, subunit IV  44.71 
 
 
96 aa  49.3  0.00002  Geobacter sulfurreducens PCA  Bacteria  normal  0.719636  n/a   
 
 
-
 
NC_011145  AnaeK_1603  caa(3)-type oxidase, subunit IV  54.17 
 
 
129 aa  48.1  0.00003  Anaeromyxobacter sp. K  Bacteria  normal  0.0480986  n/a   
 
 
-
 
NC_011891  A2cp1_1679  caa(3)-type oxidase, subunit IV  54.17 
 
 
129 aa  48.1  0.00004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1347  caa(3)-type oxidase, subunit IV  41.18 
 
 
97 aa  47.8  0.00005  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0635271  normal 
 
 
-
 
NC_014148  Plim_3992  caa(3)-type oxidase, subunit IV  39.47 
 
 
146 aa  44.7  0.0004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.768138  n/a   
 
 
-
 
NC_013440  Hoch_2703  caa(3)-type oxidase, subunit IV  36.25 
 
 
103 aa  41.6  0.003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.552252  normal  0.458911 
 
 
-
 
NC_013440  Hoch_2422  caa(3)-type oxidase, subunit IV  37.97 
 
 
129 aa  41.2  0.005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.510357  normal  0.570824 
 
 
-
 
NC_007484  Noc_1247  Caa(3)-type oxidase, subunit IV  37.88 
 
 
230 aa  41.2  0.005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6232  caa(3)-type oxidase, subunit IV  36.05 
 
 
98 aa  40.8  0.006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.12544  normal  0.0997779 
 
 
-
 
NC_009675  Anae109_0851  caa(3)-type oxidase, subunit IV  50 
 
 
133 aa  40.8  0.006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
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