19 homologs were found in PanDaTox collection
for query gene Dvul_1347 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_1347  caa(3)-type oxidase, subunit IV  100 
 
 
97 aa  189  1e-47  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0635271  normal 
 
 
-
 
NC_011769  DvMF_0534  caa(3)-type oxidase, subunit IV  69.47 
 
 
96 aa  134  5e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.15954 
 
 
-
 
NC_007519  Dde_1825  Caa(3)-type oxidase, subunit IV  69.23 
 
 
94 aa  109  1.0000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.183127  n/a   
 
 
-
 
NC_013173  Dbac_1539  caa(3)-type oxidase, subunit IV  55.68 
 
 
98 aa  92.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0251  Caa(3)-type oxidase, subunit IV  53.06 
 
 
98 aa  87  7e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.138243  normal  0.0191554 
 
 
-
 
NC_011146  Gbem_0045  caa(3)-type oxidase, subunit IV  47.83 
 
 
93 aa  85.9  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  0.602814  n/a   
 
 
-
 
NC_002939  GSU0221  cytochrome c oxidase, subunit IV  53.93 
 
 
96 aa  82.4  0.000000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.719636  n/a   
 
 
-
 
NC_012918  GM21_0044  caa(3)-type oxidase, subunit IV  44.33 
 
 
95 aa  79.7  0.00000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000561945 
 
 
-
 
NC_007498  Pcar_2528  caa3-type cytochrome c oxidase, subunit IV  43.48 
 
 
94 aa  71.2  0.000000000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0456558  n/a   
 
 
-
 
NC_008009  Acid345_2993  Caa(3)-type oxidase, subunit IV  39.73 
 
 
105 aa  60.5  0.000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.531137  normal  0.145245 
 
 
-
 
NC_011891  A2cp1_1679  caa(3)-type oxidase, subunit IV  45.83 
 
 
129 aa  51.6  0.000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2272  Caa(3)-type oxidase, subunit IV  45.21 
 
 
129 aa  51.6  0.000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.205839  n/a   
 
 
-
 
NC_011145  AnaeK_1603  caa(3)-type oxidase, subunit IV  44.78 
 
 
129 aa  51.2  0.000005  Anaeromyxobacter sp. K  Bacteria  normal  0.0480986  n/a   
 
 
-
 
NC_013440  Hoch_2422  caa(3)-type oxidase, subunit IV  37.63 
 
 
129 aa  51.2  0.000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.510357  normal  0.570824 
 
 
-
 
NC_013501  Rmar_0232  caa(3)-type oxidase, subunit IV  37.5 
 
 
122 aa  48.1  0.00004  Rhodothermus marinus DSM 4252  Bacteria  normal  0.303369  n/a   
 
 
-
 
NC_013525  Tter_1585  caa(3)-type oxidase, subunit IV  38.2 
 
 
141 aa  47.8  0.00005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_0406  caa(3)-type oxidase, subunit IV  41.18 
 
 
87 aa  43.9  0.0007  Geobacter uraniireducens Rf4  Bacteria  normal  0.823665  n/a   
 
 
-
 
NC_014148  Plim_3992  caa(3)-type oxidase, subunit IV  37.23 
 
 
146 aa  43.9  0.0008  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.768138  n/a   
 
 
-
 
NC_013440  Hoch_2703  caa(3)-type oxidase, subunit IV  39.74 
 
 
103 aa  40.4  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.552252  normal  0.458911 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>