21 homologs were found in PanDaTox collection
for query gene Gbem_0045 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_0045  caa(3)-type oxidase, subunit IV  100 
 
 		 93 aa  183  8e-46  Geobacter bemidjiensis Bem  Bacteria  normal  0.602814  n/a   
 
 
-
 
NC_012918  GM21_0044  caa(3)-type oxidase, subunit IV  81.52 
 
 		 95 aa  152  2e-36  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000561945 
 
 
-
 
NC_007517  Gmet_0251  Caa(3)-type oxidase, subunit IV  60.87 
 
 		 98 aa  103  1e-21  Geobacter metallireducens GS-15  Bacteria  normal  0.138243  normal  0.0191554 
 
 
-
 
NC_002939  GSU0221  cytochrome c oxidase, subunit IV  67.78 
 
 		 96 aa  97.1  7e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.719636  n/a   
 
 
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NC_007498  Pcar_2528  caa3-type cytochrome c oxidase, subunit IV  55.43 
 
 		 94 aa  96.3  1e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0456558  n/a   
 
 
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NC_013173  Dbac_1539  caa(3)-type oxidase, subunit IV  50.55 
 
 		 98 aa  82.8  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_0534  caa(3)-type oxidase, subunit IV  52.56 
 
 		 96 aa  79  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.15954 
 
 
-
 
NC_007519  Dde_1825  Caa(3)-type oxidase, subunit IV  47.83 
 
 		 94 aa  76.6  0.0000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.183127  n/a   
 
 
-
 
NC_008751  Dvul_1347  caa(3)-type oxidase, subunit IV  47.83 
 
 		 97 aa  75.1  0.0000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0635271  normal  1 
 
 
-
 
NC_007760  Adeh_2272  Caa(3)-type oxidase, subunit IV  40.91 
 
 		 129 aa  57  0.00000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.205839  n/a   
 
 
-
 
NC_011891  A2cp1_1679  caa(3)-type oxidase, subunit IV  42.05 
 
 		 129 aa  57  0.00000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1603  caa(3)-type oxidase, subunit IV  42.05 
 
 		 129 aa  57  0.00000009  Anaeromyxobacter sp. K  Bacteria  normal  0.0480986  n/a   
 
 
-
 
NC_013440  Hoch_2422  caa(3)-type oxidase, subunit IV  37.36 
 
 		 129 aa  51.6  0.000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.510357  normal  0.570824 
 
 
-
 
NC_014148  Plim_3992  caa(3)-type oxidase, subunit IV  35.29 
 
 		 146 aa  50.1  0.00001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.768138  n/a   
 
 
-
 
NC_008009  Acid345_2993  Caa(3)-type oxidase, subunit IV  38.16 
 
 		 105 aa  49.3  0.00002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.531137  normal  0.145245 
 
 
-
 
NC_007760  Adeh_0806  Caa(3)-type oxidase, subunit IV  37.76 
 
 		 131 aa  47.8  0.00005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_0232  caa(3)-type oxidase, subunit IV  32.99 
 
 		 122 aa  47  0.0001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.303369  n/a   
 
 
-
 
NC_011145  AnaeK_0854  caa(3)-type oxidase, subunit IV  36.73 
 
 		 130 aa  46.2  0.0002  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0858  caa(3)-type oxidase, subunit IV  36.73 
 
 		 130 aa  46.2  0.0002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0406  caa(3)-type oxidase, subunit IV  42.35 
 
 		 87 aa  42.7  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  0.823665  n/a   
 
 
-
 
NC_007348  Reut_B4438  Caa(3)-type oxidase, subunit IV  36.84 
 
 		 109 aa  40  0.01  Ralstonia eutropha JMP134  Bacteria  normal  0.538177  n/a   
 
 
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