Gene Plim_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3992 
Symbol 
ID9140712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5123199 
End bp5123639 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content55% 
IMG OID 
Productcaa(3)-type oxidase, subunit IV 
Protein accessionYP_003632002 
Protein GI296124224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.768138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCTG CAACGATGGA CCATACAGGA CACGGGCATG ACGCACACGG TCATGACGGC 
CACGCGCATC ATGGGGACGC GCATCATGGG CACGGGCACT ACCCAGGTGT GCCCAGTTAC
TCGCACATCA TGCCGCTGTG GATTCTGTTT GCCGTCTTCG CCTCCCTGAT CGCTCTGACA
GCTCTCACTG TCGCGCTATC GGGAGTTGCC CTGGGGACCG CAGAAATCTT CGTCTCGATG
GGGATTGCCA CCATCAAGGC ACTTCTCGTC GCGGTTTACT TCATGCATAT GCGGCACGAT
AAACCTTTGA ACGTGTTGAT CTGCACCTTC TCACTGGTCT TCGTGGCTCT CTTCATCGGT
CTGCTCCTCT TTGACTCGAT GGAATATTAT CCCAACATTG CGGCCCGCAC TTATGTGGAA
ATGCTGGACA AGGCCAAATA A
 
Protein sequence
MTAATMDHTG HGHDAHGHDG HAHHGDAHHG HGHYPGVPSY SHIMPLWILF AVFASLIALT 
ALTVALSGVA LGTAEIFVSM GIATIKALLV AVYFMHMRHD KPLNVLICTF SLVFVALFIG
LLLFDSMEYY PNIAARTYVE MLDKAK