10 homologs were found in PanDaTox collection
for query gene Gbem_0767 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_0767  anti-sigma-28 factor, FlgM  100 
 
 
99 aa  197  3e-50  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0784  anti-sigma-28 factor, FlgM  93.94 
 
 
99 aa  187  5e-47  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2185  flgM family protein  43.16 
 
 
102 aa  55.5  0.0000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3121  hypothetical protein  38.38 
 
 
105 aa  49.7  0.00001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1677  anti-sigma-28 factor, FlgM  42.62 
 
 
95 aa  47.8  0.00006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2286  anti-sigma-28 factor, FlgM  41.43 
 
 
101 aa  46.6  0.0001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00124858  normal  0.217258 
 
 
-
 
NC_011769  DvMF_2585  anti-sigma-28 factor, FlgM  37.5 
 
 
103 aa  43.9  0.0007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1373  putative anti-sigma-28 factor, FlgM  45.28 
 
 
92 aa  43.5  0.001  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000201318  n/a   
 
 
-
 
NC_008346  Swol_0190  putative anti-sigma-28 factor, FlgM  51.35 
 
 
97 aa  42.4  0.002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2908  Anti-sigma-28 factor FlgM family protein  41.51 
 
 
92 aa  40.4  0.008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000547564 
 
 
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