8 homologs were found in PanDaTox collection
for query gene GSU2076 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2076  cytochrome c family protein  100 
 
 
473 aa  964    Geobacter sulfurreducens PCA  Bacteria  normal  0.1436  n/a   
 
 
-
 
NC_002939  GSU1334  cytochrome c family protein  51.42 
 
 
479 aa  465  9.999999999999999e-131  Geobacter sulfurreducens PCA  Bacteria  normal  0.141552  n/a   
 
 
-
 
NC_012918  GM21_1194  cytochrome c family protein  46.75 
 
 
491 aa  376  1e-103  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_0930  cytochrome c family protein  44.71 
 
 
489 aa  370  1e-101  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000910949  normal 
 
 
-
 
NC_011146  Gbem_3056  cytochrome c family protein  47.16 
 
 
492 aa  352  1e-95  Geobacter bemidjiensis Bem  Bacteria  normal  0.245945  n/a   
 
 
-
 
NC_002939  GSU2887  cytochrome c family protein  35.79 
 
 
884 aa  54.7  0.000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.0141387  n/a   
 
 
-
 
NC_002939  GSU2808  cytochrome c family protein  31.54 
 
 
189 aa  52.4  0.00002  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000226609  n/a   
 
 
-
 
NC_008228  Patl_0286  glutamate dehydrogenase  23 
 
 
450 aa  44.3  0.005  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000707094  n/a   
 
 
-
 
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