Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2887 |
Symbol | |
ID | 2688638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3170511 |
End bp | 3173165 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637127580 |
Product | cytochrome c family protein |
Protein accession | NP_953929 |
Protein GI | 39997978 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0141387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAGGT CGAGGATTAT CACCATTTTC CCGCAGATTC TGATGTGCCT GTGGGGGGTA GCCGTCATGC TGACGGCCGG TCCGGGAATT GTCCGGGATG CCCAGGCTCT TACCGCAACC GACTGCACGA CGTGCCACAC CGGGAGCACC TACGGCTCTA TTCCCCAGCA ACACCATGCG GTAGCCAGCA GCAAGGGCAT CACCTGCCTC CAGTGCCACC GGGCGATCCC CGACGGATCG GGCGGATTCA CCATCGAGGT GATCACCGAC TGTATCGTCT GCCACGGCCA AGTGGACCAC GCTGCGGCCC ACAACATGGT TGCCACCGCG GCCGATTGCG CCCAGTGCCA CACCCAGACC CCCGTGGCCG AGCACCTGAG CAGAACGTCG TCCTGCTCCA CCTGCCATTC CAGCACGGCT CCCGCGGTGC AGAAGGCCAT CACCGACGGC CGGGCCGGCG TCATGGTCAA TTGTATCACC TGCCACGGCG CGGTGAACCA CATTGTCCAG CATGACAGGG CATTCCCCTC TCCCGACTGC GTGCAGTGCC ACGCCCAAGG GGTCGTCTTC GAACACCTGA ACCGGACCTC CACCTGCGCC ACCTGTCACG CCAGCACCCA GCCCGCGGTG CAGAAAGCCA TCGCCGACGG CCGGGCCGGC ATCGCCGTGT ACTGTGTTAC CTGCCACGGC ACGGTGAACC ACGTGCTTCA GCACGACAAG GTTTCCACGC CGGCGGATTG CTCCGGCTGC CACAATCAGG GGCCGGTCCA GGAGCACACC AACCGGACCT CCACCTGCGC CACCTGCCAC AACAGTTCCA GCACCACGGT GCAGCAGACG ATCACCCTCG GCCGGACCGG CACCATGGTT TCCTGCGCCA ACTGTCACGG CGCCGTGAAC CACATCCAGC AACACGACAA GGCCATGGCC AATGCCGACT GTGCCCAGTG CCACAACCTG GGGGTGGTGA ACGAGCACCT TTCGCGGGCT TCAACCTGCG CCACCTGCCA CTCGAGCGCC GCTCCCGCGG TCCAGCAGGC CATTGCCGCC GGCAAGGCGG GCACCACGGT CTACTGCTCC AACTGCCACG CGAACGTGAA CCACGTCCAG CAGCACGACA AGGTGACCAC CCCTGCCGAT TGCGCCTCGT GCCATGGCCA GGGCGTGGTG TACGAGCACA CGAACCGCTC TTCCACCTGC GCCACCTGCC ACAACAGCAC CAACGCCGCG GTGCAGAAGA CGATAAGCGA CGGCCGCGCC GGGATCACGG TCTCCTGCGC CAGCTGCCAC GGGGCGGTTA ACCACGTGGC CCAGCACGAT CAGGCGCTTG CCTCTCCGGC CTGTGCCCAG TGCCACACCA AGAGCGTGCT CGACGAGCAC CTGACCCGCA CGTCTACCTG CGCCACCTGC CACTCCAGCA GCAGCACGGC GGTCCAGCAG GCCATTGCCG CGGGGCGGAG CGGCCAGGCG GTCTCCTGCG TGGACTGCCA CGGCCAGGTG ACCCACCAGA GCGCCCACGA CGGCAAGGTG CTGGTCCCGT ACGGCGACTG CAGCTCCTGT CATATTCCGA ACCTGGTTGA GCTGCACGCT GTGAAGGGCT TTCAGTGCGC GGCCTGCCAC GCCAGCGATA ACGCGTCGGT GACGGCGGCG GTGCAGAAGG GGCTGGGCGG CACGCTCGTC TATTGTGCTG ACTGCCACAG CGCCATCGGC GGCTTCGGCA ACCACGCCGG GCAGCACGAC ATGGTGGGAC TGCCCGCCCC CAACTGCGGC CAGTGCCATT CGGACAACGC GGTGACAGCC CATGAGAAGG CCGCCACACC GGTCTACTGC AACGGCTGCC ATACGAGCAC CAATGAGCTG TACGTCAAGA CCATCAGCGA CGGCATGGCT GGAATCCAGC AGAACTGCCG CAGTTGCCAC ACCATGATCC ACGGCGGCGC CAACCGGGGC CCTTCGGCCA ACGCGGGGGC TGACCGGACC GTTACCGTCG GCCAGGCCAT CACCTTCTCC GGTTCGGGCT CCAGCGATCC TGACGGAAGT ATCGTGGGGT ATGTGTGGAA CTTCGGCGAC GGCACCACGG GAAGCGGGGT GAGCGTCACC AAAACCTACA CCACGGCAGG CACCTACACG GTGACCCTTA CCGTGACCGA CAACAGCGGC GACACGGCCA GCGACACGGC GGTGGTGACG GTTCAGAGCC AGGCGGGCAG CAGTTCGGTG TTTGCGGACC AGGTGCTGTA CCTGCAGCGG CTGAGCAGCG TCACCTCCTC TGACAGCAAC AGCAACGACC TGACCTCGAA GTTCCGCGAC AGCAACCTTG CAGACCGGTA TCTGCTGCAG TACAAGAGTG GCGAGAACTA CGTCATCGCC ATGAAGCTGA ACCGCGACGC CCTGACCGCA AGCAAGGTAG TGCTGCGGCT GTATGTCTCC TCCATCAGTT CGTCGCGGAC GCTGCGCATC TATCCGTACC AGTCCAACGG CACATCGGTG AACAGCTACT ACTCGGTGAG CTACAGCACG AGCAGCGCCG GCTGGAAAGA TATCGACGTC ACCTCCATCG CGCAGCGGAT GAACGGCTAC GGCTGGATGA AGTTCCGTGT CACCACCACC TCGAGCAGCC TCTATGTTGC CGAGGGGGCC TTCCTGGTGC AGTAG
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Protein sequence | MNRSRIITIF PQILMCLWGV AVMLTAGPGI VRDAQALTAT DCTTCHTGST YGSIPQQHHA VASSKGITCL QCHRAIPDGS GGFTIEVITD CIVCHGQVDH AAAHNMVATA ADCAQCHTQT PVAEHLSRTS SCSTCHSSTA PAVQKAITDG RAGVMVNCIT CHGAVNHIVQ HDRAFPSPDC VQCHAQGVVF EHLNRTSTCA TCHASTQPAV QKAIADGRAG IAVYCVTCHG TVNHVLQHDK VSTPADCSGC HNQGPVQEHT NRTSTCATCH NSSSTTVQQT ITLGRTGTMV SCANCHGAVN HIQQHDKAMA NADCAQCHNL GVVNEHLSRA STCATCHSSA APAVQQAIAA GKAGTTVYCS NCHANVNHVQ QHDKVTTPAD CASCHGQGVV YEHTNRSSTC ATCHNSTNAA VQKTISDGRA GITVSCASCH GAVNHVAQHD QALASPACAQ CHTKSVLDEH LTRTSTCATC HSSSSTAVQQ AIAAGRSGQA VSCVDCHGQV THQSAHDGKV LVPYGDCSSC HIPNLVELHA VKGFQCAACH ASDNASVTAA VQKGLGGTLV YCADCHSAIG GFGNHAGQHD MVGLPAPNCG QCHSDNAVTA HEKAATPVYC NGCHTSTNEL YVKTISDGMA GIQQNCRSCH TMIHGGANRG PSANAGADRT VTVGQAITFS GSGSSDPDGS IVGYVWNFGD GTTGSGVSVT KTYTTAGTYT VTLTVTDNSG DTASDTAVVT VQSQAGSSSV FADQVLYLQR LSSVTSSDSN SNDLTSKFRD SNLADRYLLQ YKSGENYVIA MKLNRDALTA SKVVLRLYVS SISSSRTLRI YPYQSNGTSV NSYYSVSYST SSAGWKDIDV TSIAQRMNGY GWMKFRVTTT SSSLYVAEGA FLVQ
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