14 homologs were found in PanDaTox collection
for query gene GM21_4079 on replicon NC_012918
Organism: Geobacter sp. M21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_4079  hypothetical protein  100 
 
 
368 aa  767    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3037  hypothetical protein  63.74 
 
 
368 aa  493  9.999999999999999e-139  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1213  hypothetical protein  62.84 
 
 
368 aa  489  1e-137  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0817  hypothetical protein  30.7 
 
 
390 aa  123  6e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000194581 
 
 
-
 
NC_013421  Pecwa_2437  hypothetical protein  31.76 
 
 
430 aa  120  6e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2824  PAAR repeat-containing protein  28.04 
 
 
456 aa  86.3  7e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3237  PAAR repeat-containing protein  32.99 
 
 
456 aa  83.2  0.000000000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2512  PAAR repeat-containing protein  26.21 
 
 
461 aa  76.3  0.0000000000009  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7559  phospholipase A1  31.25 
 
 
460 aa  60.8  0.00000003  Agrobacterium vitis S4  Bacteria  normal  0.271597  n/a   
 
 
-
 
NC_009708  YpsIP31758_1123  lipase family protein  32.67 
 
 
320 aa  54.7  0.000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.81089  n/a   
 
 
-
 
NC_010159  YpAngola_A3597  phospholipase A  32.67 
 
 
320 aa  54.7  0.000003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1175  phospholipase A(1)  32.67 
 
 
320 aa  54.7  0.000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2303  hypothetical protein  29.31 
 
 
432 aa  44.3  0.004  Halothiobacillus neapolitanus c2  Bacteria  normal  0.457851  n/a   
 
 
-
 
NC_009832  Spro_3681  phospholipase A(1)  28.57 
 
 
320 aa  43.5  0.006  Serratia proteamaculans 568  Bacteria  normal  0.0179206  normal  0.113724 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>