7 homologs were found in PanDaTox collection
for query gene EcolC_3438 on replicon NC_010468
Organism: Escherichia coli ATCC 8739



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010468  EcolC_3438  hypothetical protein  100 
 
 
180 aa  366  1e-101  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0756  hypothetical protein  79.1 
 
 
178 aa  292  2e-78  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0961  hypothetical protein  40.56 
 
 
193 aa  140  9.999999999999999e-33  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1651  hypothetical protein  41.38 
 
 
187 aa  133  9.999999999999999e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.810613 
 
 
-
 
NC_014148  Plim_1999  putative virion core protein (lumpy skin disease virus)-like protein  39.29 
 
 
375 aa  48.5  0.00005  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2235  putative virion core protein (lumpy skin disease virus)-like protein  35.94 
 
 
369 aa  43.9  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.315072  normal 
 
 
-
 
NC_011071  Smal_3590  RDD domain containing protein  40 
 
 
310 aa  43.5  0.001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
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