| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2235 |
|---|
| Symbol | |
|---|
| ID | 5083729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2269770 |
|---|
| End bp | 2270879 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640483799 |
|---|
| Product | putative virion core protein (lumpy skin disease virus)-like protein |
|---|
| Protein accession | YP_001168430 |
|---|
| Protein GI | 146278271 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.315072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCT TCGATTTCCT CGGCGGAGAG TTCATCGACG TCATCCACTG GGTCGATGAC
ACGCGCGACA CGATGGTCTG GCGCTTCGAG CGGCAGGGCC ATGCGATCAA GTATGGCGCC
AAGCTGACCG TGCGCGAGGG GCAGGCCGCC GTCTTCATCC ACGAGGGGCA GCTCGCCGAT
GTCTTCGGCC CCGGTCTCTA CATGCTCGAG ACCAACAACC TGCCGATCCT GACCACGCTG
CAGCACTGGG ACCACGGCTT CCGCTCGCCC TTCAAGTCCG AGGTCTATTT CGTCAACACC
ACCCGCTTCA ACAACCAGAA GTGGGGCACG AAGAACCCGA TCATCTGCCG CGACCCCGAG
TTCGGCCCGG TGCGCCTGCG CGCCTTCGGC ACCTATTCGA TGCGTGTGAC CGATCCCGGC
CGCTTCATGA CCGAGATCGT GGGCACCGAC GGCGAGTTCA CCGCCGACGA GATCAGCTTC
CAGATCCGCA ACGTGATCGT GCAGGAGATG GGCCGCGCGC TGGCGGCCTC GACCATTCCC
GTGCTCGACA TGGCGGCCAA CACGGCCGAT CTGGGCAAGC TGGTGGCGCA GGCCATCGCG
CCCACCGTCG CGGCCTACGG GCTCTCGATC CCCGAACTCT ACATCGAGAA CATCTCGCTG
CCGCAGGAGG TCGAGAAGGC GCTCGACAAG CGCACATCCA TGGGCATCGT GGGCGATCTC
GGCCGGTTCA CGCAATACAG CGCGGCCGAG GCCCTGTCGG CGCCGAACTC GGCCGCAGGC
GCCGCGGTGG CGAGCGGCAT GGGGGCGGCC ATGGGCTTCG GAATGGCGCA GCGCATGGGC
CCCTGGGGCG CCGCCCCCGA GGCGGCTGCG CAGGCCGCGC CACCTCCGCC CCCACCGCCG
GCCGAGCCGG TCTGGCACGT GGCGGCCAAC GGCCAGTCCG AAGGCCCCCT CGCCCGCGCC
GATCTGGCCG CCCGCGTCTC GGCGGGCACC CTGACGCGCG CGACGCTCGT CTGGACGCCG
GGACAGGAAG GCTGGCAACC CGCGGGCGAG GTTCCCGCAC TCGCCGGGCT CTTCGCGCAC
ATGCCGCCGC CCCTGCCGCC GGGGGCCTGA
|
|---|
| Protein sequence | MPIFDFLGGE FIDVIHWVDD TRDTMVWRFE RQGHAIKYGA KLTVREGQAA VFIHEGQLAD
VFGPGLYMLE TNNLPILTTL QHWDHGFRSP FKSEVYFVNT TRFNNQKWGT KNPIICRDPE
FGPVRLRAFG TYSMRVTDPG RFMTEIVGTD GEFTADEISF QIRNVIVQEM GRALAASTIP
VLDMAANTAD LGKLVAQAIA PTVAAYGLSI PELYIENISL PQEVEKALDK RTSMGIVGDL
GRFTQYSAAE ALSAPNSAAG AAVASGMGAA MGFGMAQRMG PWGAAPEAAA QAAPPPPPPP
AEPVWHVAAN GQSEGPLARA DLAARVSAGT LTRATLVWTP GQEGWQPAGE VPALAGLFAH
MPPPLPPGA
|
|---|
| |