10 homologs were found in PanDaTox collection
for query gene DvMF_2908 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_2908  MJ0042 family finger-like protein  100 
 
 
566 aa  1127    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.218817 
 
 
-
 
NC_008751  Dvul_2123  hypothetical protein  40.75 
 
 
426 aa  294  3e-78  Desulfovibrio vulgaris DP4  Bacteria  decreased coverage  0.00645364  normal 
 
 
-
 
NC_011883  Ddes_0595  hypothetical protein  28.57 
 
 
428 aa  152  1e-35  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  unclonable  0.00000214517  n/a   
 
 
-
 
NC_007519  Dde_1116  hypothetical protein  33.5 
 
 
471 aa  135  1.9999999999999998e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000000481431  n/a   
 
 
-
 
NC_013223  Dret_1951  MJ0042 family finger-like protein  37 
 
 
321 aa  119  9.999999999999999e-26  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.683994 
 
 
-
 
NC_013173  Dbac_2389  MJ0042 family finger-like protein  28.57 
 
 
312 aa  70.5  0.00000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_1632  large adhesin  25.97 
 
 
2914 aa  55.5  0.000002  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1450  Cobyrinic acid ac-diamide synthase  51.43 
 
 
305 aa  47  0.0008  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000235787  n/a   
 
 
-
 
NC_009483  Gura_4142  hypothetical protein  51.52 
 
 
434 aa  44.7  0.004  Geobacter uraniireducens Rf4  Bacteria  normal  0.633496  n/a   
 
 
-
 
NC_007517  Gmet_1032  Zinc finger/thioredoxin putative  35.42 
 
 
501 aa  44.7  0.005  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000000300649  hitchhiker  0.0000540788 
 
 
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