Gene DvMF_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2908 
Symbol 
ID7174850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3675060 
End bp3676760 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content70% 
IMG OID643541441 
ProductMJ0042 family finger-like protein 
Protein accessionYP_002437313 
Protein GI218887992 
COG category[S] Function unknown 
COG ID[COG2881] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR02098] MJ0042 family finger-like domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.218817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATAC GCTGCCCGGA GTGCCAGTTC GAACGGAGCA TCGACAGCAG CAAGATTCCG 
TCCTCGGCCG CCATCGCCAC CTGTCCCAAG TGCCGTCACC GTTTCCGTTT TCGCGCCCTG
GCACCTGATG AAACCCCGGA CGTTTCCCCC GCCGGGCACA CCGAGCAGGC CCCTCGCGCC
CCGCAGGCCC CTCGCGCCCC GCAGGCTGCG GACGCGGGCT CTCGCCGCAC GCCGGATGAT
GCGGTGGCGC CCGGCGCCAT GCCCCATGCC GGGCCTGCCA TGGATCAGGA CGAGGACGAC
GACATTCCCG CCACCTTCCG GCGTGGCACC TCCGCCACTT CGCAGACCCC GGCGTCCGGC
GCATCGCTTC CGCCGGATGG GGCTGACGGA CCTGACGGGG CTGACGAGTC TGACGTATCC
GCCACCTCGG GCGTATCTGG CGTATCTGGC GTATCTGGCG CAGAAGCCGA CTATACCGGA
GAGGACGACC ACGTGGGCGA ACCCCGCCCC GTCTCCGGCA CCGGCACGCC GCGCATGGCC
GATCCGGGCG CTTCATCCAC CGCCCCCCAT CCGGCGGGCA CCGCGCCTTC CAGCGCCGAC
GCGCCCCGCA ACGCCCACGG GCACACCGAT CTTTCCCGCC CCGGCGACGA CCCGCTGCCC
CCCGGCGCGG TGATTCCGGG CCGGAGCAGC ACCCCCGCCC ACGACGACGA TCACGATGCC
CCCAACGGGC GCGACGCCGC CCCGGGTTCC GCCGGGGGAC AGCGCCGCCC CGGCTCGCCC
CGCGACATCT GGGACGCCGT GGCCTCGGTG GGCGACCGCT GGCGCAAGCA GTCCGAATCC
CGCACGCGGC CCGACAACGG CGGCCACCCC CACGACCGGG ACAACTACCG GAACGGTACC
CCCGGCGACT CCCCAAACGG TGCCCCAAAT GGTGCCCCAA ATGGTGCCCC AAATGGTGCC
CCAAATGGTG CCCCTGACGG ATGGAACGCC GGAAACCACG GCGATGCCTT TCCCCCGCAC
GATGGCGGGC ACCCCGGCGA ACGGGACGCC CCCCTGCCGC CGTGGGCAGC ATCCGCCCGC
AGTGAGGTGC CGTGGGAAAA CCTGGACCGT GTGGGCTTTT TCCCCGGCCT GTACCAGACC
ATCCTGCGGG TGATGCTGGC GGCGCCGCGC TTCTTCTCCG GGGTGCGTTC CTCGGGCTCG
CTCAAGCGGC CGGTGGCGTT CTACCTGCTC ATCGGCATCT TTCAGGCGCT CACCGAGCGG
CTGTGGTATC TCATGAGCAT GCGCGCCTTC GGCGGCTTCA TCGAAGACCC GCAACTGCAC
GCCTGGATGG GCAGTGTCAC CCACGACATG AGCCTGCCCC TGACCCTGCT GGTCTCGCCC
TTCACCCTGC TGCTGCAACT GGCGGTGCTG TCCGGCCTGT ACCACTTCAT GATCCGGCTG
GTGGAGCCGC GTGCGGCAGA CCTGCCCACC ACGGTGCGGG TCATCTCGTA CAGTGCCGCG
CCCACGGTGC TCAGCGTGGT GCCGCTGGTG GGGCCGGTGG TGGGTTCGCT GTGGTTCGTG
GTATGTACCT TCGTGGGGGT CAAGTACGCT CACCGGCTGC CCTGGTCGCG CACGGCGCTG
GCCATCGGCC CTCTGCTGGG GCTGGGCTTC GCGCTGACGG TGCAGCTGCT GCGCATGTTC
ATGTCCTCGG CCCCCATGTA G
 
Protein sequence
MIIRCPECQF ERSIDSSKIP SSAAIATCPK CRHRFRFRAL APDETPDVSP AGHTEQAPRA 
PQAPRAPQAA DAGSRRTPDD AVAPGAMPHA GPAMDQDEDD DIPATFRRGT SATSQTPASG
ASLPPDGADG PDGADESDVS ATSGVSGVSG VSGAEADYTG EDDHVGEPRP VSGTGTPRMA
DPGASSTAPH PAGTAPSSAD APRNAHGHTD LSRPGDDPLP PGAVIPGRSS TPAHDDDHDA
PNGRDAAPGS AGGQRRPGSP RDIWDAVASV GDRWRKQSES RTRPDNGGHP HDRDNYRNGT
PGDSPNGAPN GAPNGAPNGA PNGAPDGWNA GNHGDAFPPH DGGHPGERDA PLPPWAASAR
SEVPWENLDR VGFFPGLYQT ILRVMLAAPR FFSGVRSSGS LKRPVAFYLL IGIFQALTER
LWYLMSMRAF GGFIEDPQLH AWMGSVTHDM SLPLTLLVSP FTLLLQLAVL SGLYHFMIRL
VEPRAADLPT TVRVISYSAA PTVLSVVPLV GPVVGSLWFV VCTFVGVKYA HRLPWSRTAL
AIGPLLGLGF ALTVQLLRMF MSSAPM