11 homologs were found in PanDaTox collection
for query gene Dshi_3293 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_3293  hypothetical protein  100 
 
 
272 aa  544  1e-154  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3682  FkbM family methyltransferase  25.87 
 
 
279 aa  54.3  0.000002  Methylobacterium extorquens PA1  Bacteria  normal  0.391907  normal 
 
 
-
 
NC_007614  Nmul_A0295  methyltransferase FkbM  25.45 
 
 
297 aa  53.9  0.000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2894  methyltransferase FkbM  23.14 
 
 
296 aa  46.6  0.0004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2680  methyltransferase FkbM family  25 
 
 
429 aa  46.2  0.0005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3423  FkbM family methyltransferase  24.57 
 
 
314 aa  45.4  0.001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0570785 
 
 
-
 
NC_009719  Plav_1323  FkbM family methyltransferase  24.2 
 
 
257 aa  45.1  0.001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0619476  hitchhiker  0.000000000782975 
 
 
-
 
NC_010338  Caul_4928  FkbM family methyltransferase  26.11 
 
 
332 aa  44.7  0.002  Caulobacter sp. K31  Bacteria  normal  0.925294  normal 
 
 
-
 
NC_010511  M446_5723  FkbM family methyltransferase  30.81 
 
 
265 aa  43.9  0.003  Methylobacterium sp. 4-46  Bacteria  normal  0.0496638  hitchhiker  0.00533118 
 
 
-
 
NC_011662  Tmz1t_2883  methyltransferase FkbM family  24.71 
 
 
309 aa  43.1  0.004  Thauera sp. MZ1T  Bacteria  normal  0.241941  n/a   
 
 
-
 
NC_009485  BBta_3801  putative methyltransferase FkbM  29.3 
 
 
239 aa  42.7  0.006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.403441  normal 
 
 
-
 
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