10 homologs were found in PanDaTox collection
for query gene DhcVS_1122 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_1122  ABC transporter, permease protein  100 
 
 		 231 aa  451  1.0000000000000001e-126  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
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NC_009455  DehaBAV1_1151  ABC-2 type transporter  94.81 
 
 		 231 aa  436  1e-121  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
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NC_002936  DET1340  ABC transporter, permease protein, putative  92.21 
 
 		 231 aa  422  1e-117  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
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NC_011832  Mpal_2703  cytochrome c-type biogenesis protein CcmB  34.16 
 
 		 235 aa  79.7  0.00000000000003  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
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NC_009051  Memar_0810  cytochrome c-type biogenesis protein CcmB  32.23 
 
 		 232 aa  76.3  0.0000000000004  Methanoculleus marisnigri JR1  Archaea  decreased coverage  0.00450411  n/a   
 
 
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NC_010003  Pmob_1531  hypothetical protein  30.22 
 
 		 215 aa  48.9  0.00006  Petrotoga mobilis SJ95  Bacteria  normal  0.194953  n/a   
 
 
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NC_013158  Huta_2634  ABC-2 type transporter  27.03 
 
 		 276 aa  45.8  0.0006  Halorhabdus utahensis DSM 12940  Archaea  normal  0.495596  n/a   
 
 
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NC_007796  Mhun_0223  hypothetical protein  24.15 
 
 		 251 aa  45.1  0.001  Methanospirillum hungatei JF-1  Archaea  normal  0.587044  normal  0.793487 
 
 
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NC_006274  BCZK4983  ABC transporter, permease  27 
 
 		 234 aa  43.1  0.003  Bacillus cereus E33L  Bacteria  normal  0.209432  n/a   
 
 
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NC_013440  Hoch_3360  cytochrome c-type biogenesis protein CcmB  26.92 
 
 		 247 aa  42.7  0.005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.279327  normal  0.159324 
 
 
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