Gene DET1340 details

Gene Information

• Locus tag: DET1340
• ID: 3229390
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1211305
• End bp: 1212000
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637120902
• Product: ABC transporter, permease protein, putative
• Protein accession: YP_182051
• Protein GI: 57233925

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAATA TATTTACGGT AGCTAAAAAG GAAATCCGGT ATAACTTCAG CAACAGGGGT 
ATGCTTATTC AGGCGCTCAT TATGCCCGTA CTGTTCGGTT TTCTGTATTC CAATAATCTG 
TCCAGTCAAG CTGGTATGAA TTTATCCATT AACGGCATAG TCTTTTACCT GTCCATTATG 
ATAAGTGCCT TTATGTCTTA TATGTTCCTC AGCCAGGCAT TCGTAATGGA AAAATACACC 
CGCACTATTG AAAGCCTGAT GTGCACCCCG CTCAGCCTGC GGGATATTCT GCTGGGCAAA 
GTGCTGGGGG TAAGCGTCTC CACCTACCCG TTTGTCCTGC TGGCCGTCTT GATACCCATT 
ATCCGTACCG GTCTTGAAAA CGGGGAGTTT ATACTGCCCT CGCTGGCGAT ATTTGTTCAG 
GTGCTGTTTG TGACCCCGCT GGTTATTATG GGCTTTGTAA ACCTGATGGG CTTTTTAAAC 
CTGTATGTGG GGCTGAAGGA GTACCGCATT CTAACCCTGA TAGTCTTCGT ACCCCTGTTC 
GGCCTGATGG GTGCGGGTAT AGGCCTGGCC AGCAATATTG ATGCCCAGTG GGCTCTGGTA 
GGCATAGTAG CCGGTGTGGC AGTATTGCTG CTGGCTATTT CTACTTACCT GACCCGCTTT 
CTCAGCCGGG AAAGGATAGT AACCACCCTG CCCTAA 

 

Protein sequence

MQNIFTVAKK EIRYNFSNRG MLIQALIMPV LFGFLYSNNL SSQAGMNLSI NGIVFYLSIM 
ISAFMSYMFL SQAFVMEKYT RTIESLMCTP LSLRDILLGK VLGVSVSTYP FVLLAVLIPI 
IRTGLENGEF ILPSLAIFVQ VLFVTPLVIM GFVNLMGFLN LYVGLKEYRI LTLIVFVPLF 
GLMGAGIGLA SNIDAQWALV GIVAGVAVLL LAISTYLTRF LSRERIVTTL P