Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0810 |
Symbol | |
ID | 4845916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 793972 |
End bp | 794670 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640115495 |
Product | cytochrome c-type biogenesis protein CcmB |
Protein accession | YP_001046725 |
Protein GI | 126178760 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00450411 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGC TCGCCGTCAT CGCCCGGCGC GAGATAAGGC TCGCCCTCCG GAACCGGAGT GCCCTCATCG CGGCGCTCAT CTTCGCCGTA TGGTTCCCGG TCATGTCGGC CCTCGGGATC GCTGCAAGCG CCGGTGAAGA CGCTACGGCC GTTGCCGGCG GCATCGCCGC AATCACCCTC CCGGTCGGGG CATTTATGGG CTATCTCTTC TGCGCCGACG CCTTCCTCCG GGAGAAGCGG GACGGCTCCA TCGAGACGCT CCTCTGCACC CCGGTCTCTC TCCGCCGCCT CTGGGAGGGG AAGGCCGTCG GGGTCGCCGT GCCGGCGTAC CTGATGACCC TTGCCTCGGC CGCAGTGACC ATTGCGGTGG TTTACACCTT GTCGAGCGCT CCTATAGCCG GCGAACCCCT GCTCATCCTT CACCTCGCGG TCGTCGTCCC GGTCTGGATC GCCGCTGCGG CGGGGCTCAT CGGCGCGGCC CAGCTCGCGC TCGGGATGCG GGAGAACCAG ATCCTCGGGT TCGTCTTCAT CTTCGGGTTC ATCTTCCTCA TCGTCGTGCT CCAGGGCGTC ACACCGGGCG GGGGCCTCTC GGTGACGACG GAGGGTATTT TCGCGGCAGC AGGGCTCGCG CTCCTCGCTC TCGCCCGCTT CATCGCCGGG AAGGTGACGA AGGAGCGGAT CGTCCGGACG ATCCCGTGA
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Protein sequence | MSTLAVIARR EIRLALRNRS ALIAALIFAV WFPVMSALGI AASAGEDATA VAGGIAAITL PVGAFMGYLF CADAFLREKR DGSIETLLCT PVSLRRLWEG KAVGVAVPAY LMTLASAAVT IAVVYTLSSA PIAGEPLLIL HLAVVVPVWI AAAAGLIGAA QLALGMRENQ ILGFVFIFGF IFLIVVLQGV TPGGGLSVTT EGIFAAAGLA LLALARFIAG KVTKERIVRT IP
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