5 homologs were found in PanDaTox collection
for query gene Dfer_4295 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_4295  hypothetical protein  100 
 
 
127 aa  257  5.0000000000000005e-68  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2132  transcriptional regulator, XRE family  29.66 
 
 
121 aa  64.7  0.0000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0318081  normal 
 
 
-
 
NC_013061  Phep_2868  hypothetical protein  34.33 
 
 
77 aa  46.6  0.0001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.108097  normal  0.596678 
 
 
-
 
NC_008639  Cpha266_1701  helix-turn-helix domain-containing protein  23.14 
 
 
126 aa  42  0.003  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.0000854587  n/a   
 
 
-
 
NC_011060  Ppha_1597  helix-turn-helix domain protein  23.14 
 
 
126 aa  41.6  0.004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>