| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2132 |
|---|
| Symbol | |
|---|
| ID | 8225704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2599888 |
|---|
| End bp | 2600253 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644929969 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003086520 |
|---|
| Protein GI | 255035899 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0318081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCA TAAAATCAGA AAAAGAGTAC GAAGACGCGC TTGAAGAGGT AAACACTTTA
ATGAAAAAAG GCGACGATCT TATTTCAGAC GAAGAAGCGG ACCGGGTGGA GGAACTCGCT
TTGGCAATCC AAGCATATGA AGACGTTCAC TACCCCTTCC CAATGCCCAA ATCAATCCCG
GAATTGGTGG AGAGCAAACG TTTTGAACTT AATCTTTCAA TAGCCGGTCT TGCGGAATTG
CTAGGACTAG GCAAGACAAA GCTCTCCAAG ATCCTGCGCG GTCAACGCGA TCCGGACATA
CCGTTCCTCA AAGCAGTCTA CCACAAACTA GGCATCGATC CCGGCGTTTT GCTGGACAAT
GCATAG
|
|---|
| Protein sequence | MEAIKSEKEY EDALEEVNTL MKKGDDLISD EEADRVEELA LAIQAYEDVH YPFPMPKSIP
ELVESKRFEL NLSIAGLAEL LGLGKTKLSK ILRGQRDPDI PFLKAVYHKL GIDPGVLLDN
A
|
|---|
| |