14 homologs were found in PanDaTox collection
for query gene Cthe_3163 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_3163  carbohydrate-binding family 25 protein  100 
 
 
163 aa  322  2e-87  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2169  carbohydrate-binding family 25 protein  54.37 
 
 
121 aa  123  1e-27  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000539346  n/a   
 
 
-
 
NC_009012  Cthe_1080  carbohydrate-binding family 25 protein  42.06 
 
 
107 aa  98.6  3e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1937  carbohydrate-binding family 25 protein  39.6 
 
 
129 aa  88.2  5e-17  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00703894  hitchhiker  0.000000196006 
 
 
-
 
NC_013385  Adeg_1051  hypothetical protein  39 
 
 
105 aa  76.3  0.0000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_16020  Carbohydrate binding family 25  37.11 
 
 
105 aa  74.7  0.0000000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0832  Carbohydrate binding family 25  37 
 
 
134 aa  73.9  0.0000000000009  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0956  hypothetical protein  37.5 
 
 
157 aa  68.9  0.00000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1305  hypothetical protein  35.64 
 
 
106 aa  59.7  0.00000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.000186511 
 
 
-
 
NC_009253  Dred_2336  carbohydrate-binding family 25 protein  33.96 
 
 
129 aa  58.2  0.00000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3604  hypothetical protein  34.57 
 
 
108 aa  56.6  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1163  carbohydrate-binding family 25 protein  30.49 
 
 
105 aa  47.8  0.00007  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00003822  n/a   
 
 
-
 
NC_013216  Dtox_3542  hypothetical protein  37.1 
 
 
108 aa  45.4  0.0003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0786  hypothetical protein  30.26 
 
 
122 aa  44.7  0.0005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>