| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1163 |
|---|
| Symbol | |
|---|
| ID | 6025814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1217967 |
|---|
| End bp | 1218284 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641593978 |
|---|
| Product | carbohydrate-binding family 25 protein |
|---|
| Protein accession | YP_001717306 |
|---|
| Protein GI | 169831324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00003822 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTAG CCCAAGGCCG AAACTTTTTG GATAATCGCG TTGACGTAAT CCCCTCCCCC
AGCCTGAAGG ACCACCATGC GACCATCCGC TACGAGGGGT TGCTCCAGAA ATGCGGTGCC
GACCGGGTCT TCATTCATTA CGGCTTTGAC GGTTGGCATA ACAGTTCCGT CACCGAAATG
CGGCGTGAAC CGGATGGTTC ATTTGCCTGT TCGATTCCGA TGCAGGGCCA GAGAGAATGC
AATTTCTGCT TCAAAGACGC CGCGGACAAC TGGGACAACA ACAACGGCTG GAACTGGGCC
ACCGACATCA GATACTGA
|
|---|
| Protein sequence | MYVAQGRNFL DNRVDVIPSP SLKDHHATIR YEGLLQKCGA DRVFIHYGFD GWHNSSVTEM
RREPDGSFAC SIPMQGQREC NFCFKDAADN WDNNNGWNWA TDIRY
|
|---|
| |