Gene Cthe_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1080 
Symbol 
ID4811378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1288334 
End bp1288657 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID640106502 
Productcarbohydrate-binding family 25 protein 
Protein accessionYP_001037505 
Protein GI125973595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAA GCACCAAAGT AAACAACGAT TATATGTCCA ACGGTATTAC CATAAAGCCT 
GCTGTTCCCA CCGCAGGAGA GAATTTAACC GTCATGTACG ACGGTCTTCT TTCCAAAAGC
GGTGCATCCC ATGTATATGC CCATGTAGGT TTTGACAGAG ACTGGAAACA TGTTTATGAC
TATCCTATGA AAAGGACTTC AATAGGATTT GAGGCAACAA TACCGGTTAT GGAAGCCGAC
ACCCTGAACA TCTGCTTCAA AGACTGTGCA AACAACTGGG ACAACAACTC AGGCGCAAAC
TATACTTTCG ATATATCCAA ATAA
 
Protein sequence
MPRSTKVNND YMSNGITIKP AVPTAGENLT VMYDGLLSKS GASHVYAHVG FDRDWKHVYD 
YPMKRTSIGF EATIPVMEAD TLNICFKDCA NNWDNNSGAN YTFDISK