12 homologs were found in PanDaTox collection
for query gene Cthe_2148 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_2148  carbohydrate-binding, CenC-like protein  100 
 
 
254 aa  519  1e-146  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.912332  n/a   
 
 
-
 
NC_009012  Cthe_3096  hypothetical protein  40.57 
 
 
311 aa  157  2e-37  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000131499  n/a   
 
 
-
 
NC_009012  Cthe_3095  glycosyl transferase family protein  39.25 
 
 
968 aa  155  8e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.42978  n/a   
 
 
-
 
NC_011898  Ccel_0881  carbohydrate-binding, CenC-like protein  32.48 
 
 
433 aa  71.2  0.00000000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.000000527436  n/a   
 
 
-
 
NC_005945  BAS1022  wall-associated protein  27.98 
 
 
2224 aa  50.1  0.00004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1094  wall-associated protein  27.98 
 
 
2224 aa  50.1  0.00004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1178  putative wall-associated protein  27.98 
 
 
2224 aa  49.7  0.00004  Bacillus cereus AH820  Bacteria  n/a    normal  0.811104 
 
 
-
 
NC_003909  BCE_1275  wall-associated protein, putative  28.57 
 
 
2221 aa  49.7  0.00005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3445  wall-associated protein  28.57 
 
 
2178 aa  48.9  0.00007  Bacillus cereus B4264  Bacteria  normal  0.837931  n/a   
 
 
-
 
NC_009012  Cthe_2805  carbohydrate-binding, CenC-like protein  26.54 
 
 
460 aa  44.3  0.002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0403261  n/a   
 
 
-
 
NC_014165  Tbis_1021  carbohydrate-binding CenC domain-containing protein  27.62 
 
 
490 aa  42.4  0.007  Thermobispora bispora DSM 43833  Bacteria  normal  0.278615  normal  0.298749 
 
 
-
 
NC_013132  Cpin_3958  OmpA/MotB domain protein  30.77 
 
 
499 aa  42  0.009  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.330203 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>