| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3958 |
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| Symbol | |
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| ID | 8360131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4919753 |
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| End bp | 4921252 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966132 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003123621 |
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| Protein GI | 256422968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.330203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCT GTGTTAGAAA AAGTATCTTA ACGATACTAC TATGCTGTTA CTGTACATTG
GGGCTGATAG CCCAGAACCT GGTGCCAAAC GCTTCCTTCG AAGATGTAAA TATCTGTACG
GAATATACAG CTCCCTGTGC TCCATCCGCC TGGCTTTCGG TTGCGCCGGA AGTCGCGAGG
ATGAAATACC TATGTAATGG CGCAGCCTTG CAGGGACAGC ACTATGTCAA TCTCCTCCAG
GAAGGCAAAG AAAATCCCGA TTTAAGAGTG TATATACAGA CCCGGCTGCT TTGTCCGCTG
GAGAAAGGTC GTACCTATAA AATCCGTATT TACATGAATA CGGATAACTA CCCTTTACGG
GCGGGTATCC GCTTTGATAC GGCATTTGTA TTCACCCAGA GTGGTAGTTG CCTGAAAGCA
CCCGCTAGTC TTGAACTCAG TGAAAATGAT GTTCAGAAGA AGCTATTCCG CCTGAATCAT
CCCTGGTATA TGCTGGAGAA GACCTATGTG GCGACAAATA ATGCGACCCA TCTGCTGATT
GGTAACTTCC GGGCGCCACA ACGGAAGGAG GGCGCCGGTG GCGGCTATAG TAATGCGCAA
TTACTGATCG ATAGTATCAG TGTAACGCCG GAGGGGGGAC CGCCGTTTTG TCCGGATGCC
GATAGTACCA TTGCCCTGTT ATATACAGAG CATCACCGGC ATACGATTCC GGAAAAACTC
ATTGCTTCCG GTGATCTGAT TCATCGCCTG GATGGTACTT CCGGATGTGA TACGATCATC
CTGAAAGACG ACCTTTTTAC TGTAGATAAG AATAGTCTGA ATGACCGATA TAAACAGCAG
ATAGACGAGG CGCTGAACCG CTACAAGGGC AACCGTGCCC GTATTCAGCT GATAGGGTAT
GCATGGCAAA AGGCTTCTGA AGAATATAAC AGGATCATAT CTGCGGATAA GGCCAAGGCA
GTCGCCAATT ACCTGGTGTA TAACGAGGGC TATAGCTTTG ATGATTTTGA AGTACAGGGA
GCCGGTAAAA CAAAGCCCCG TTATGATACG GCAGGGAATA CGGCCGGAGA AAACAACCGG
GTGGAAATGA TTATTTGTCG CCCGCCACTG GCTAAAGATA CCATGCGCCC CCGGCCCGTA
GTACATCAGC CGGATACGTT GGTTATTCCG GATATTCTCT TTAAATTCAA TAGCAGCGAA
TTAAATAAAA ACCTGTATAG CTCACTCGAT AGCCTGATCA AAAGAATACC CCGTGATGGC
AGCATACAGT TGCAGGTAAA CGGACATACA GACAATGCGG GTACCTCCGC TTACAACAAT
TCGCTTTCCA TGAAAAGGGC CAATGCGGTG GCCGGTTATA TGCAGGAACA TGGTCTTGGA
AATGATATCC GCCTGATTAC CGGTGTAGGT GAAAGTCAGC CGGTAGCCGA TAACCAATCT
GCAGCAGGAA GAAGAAGAAA CCGCAGGGTA GAGATTATTA TATTCTACAG TCCGGATTGA
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| Protein sequence | MPACVRKSIL TILLCCYCTL GLIAQNLVPN ASFEDVNICT EYTAPCAPSA WLSVAPEVAR
MKYLCNGAAL QGQHYVNLLQ EGKENPDLRV YIQTRLLCPL EKGRTYKIRI YMNTDNYPLR
AGIRFDTAFV FTQSGSCLKA PASLELSEND VQKKLFRLNH PWYMLEKTYV ATNNATHLLI
GNFRAPQRKE GAGGGYSNAQ LLIDSISVTP EGGPPFCPDA DSTIALLYTE HHRHTIPEKL
IASGDLIHRL DGTSGCDTII LKDDLFTVDK NSLNDRYKQQ IDEALNRYKG NRARIQLIGY
AWQKASEEYN RIISADKAKA VANYLVYNEG YSFDDFEVQG AGKTKPRYDT AGNTAGENNR
VEMIICRPPL AKDTMRPRPV VHQPDTLVIP DILFKFNSSE LNKNLYSSLD SLIKRIPRDG
SIQLQVNGHT DNAGTSAYNN SLSMKRANAV AGYMQEHGLG NDIRLITGVG ESQPVADNQS
AAGRRRNRRV EIIIFYSPD
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