| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2805 |
|---|
| Symbol | |
|---|
| ID | 4809642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 3305884 |
|---|
| End bp | 3307266 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640108225 |
|---|
| Product | carbohydrate-binding, CenC-like protein |
|---|
| Protein accession | YP_001039197 |
|---|
| Protein GI | 125975287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0403261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACTTTA CAGCCTCCAC AACCAGTGTT GATATTGCAG TGCGTCTGGG TTACACAAAC
AGCAAAGTGA CCGGAACCGC ATGGTTTGAT AATATAACGG TGGAGCATTT GCCAAAAACC
GTATTTACAG AAGATTTTGA AAACGGTCTT TCCTCCAATT GGGAAATAAG ATCGTCAAAA
CATGGCAATT CTCTGGCAAC CGTAACTGTC GAATCAGGCA CAGGTGTAAA CAACAGTAAA
TGTTTAAAAA TAAGCTCATT AGCACAGGAT GAAGATGTCG GATGCGTAAA AACCCTTCAA
CTTGCTCCAA ACAGCTATTA TAAACTTAGT GCCCTTATGA AGTACGAAAA TGTAACTCCG
GGTAAAAGTG ACGGAGCCAA TATTTGCCTC TATAACAATG AAGGTGAAGA TGCAATATGG
ATTCGAACAG CCACAGCAAC CGGAACAAAT ACTTCATGGG AATTAGTAAA ACTGCTTTTC
AAAACTCCGG ATTCCGGCAG TGTGAACATT GGCTTGCGTT TAGGCTTTCT TAATTGCGAA
ACCAAAGGTA CTGTGTGGTT TGACAATGTC AAGGTAGAAG CTGTACCTTC CGATTATATT
TACGAATCAG AGCATATTAT TGCTTGCTTT GAAACTGACG ATACCCAGTT TGCGACAAGG
GAAGGTATTC TTAACTGGTT GTCGGAGTTG GATAAAGTAT ATGTTTTGAT GAAAGAATTC
TCCGGAAACA GAGTGCCTTT TGACGGCAAA AAAATGGGAA TATTATCATC AGACAGCCAT
TCAGGCGGTG TCGGCGCTTA TGCGGGAGAT CCCATAATGT GGTTTAAAAG CGCCAACGAC
AATCCTGTAG CTTATCAGTT AAAAATGACT TGTGAACACG GAGATTTATC TTTTGCAATT
TTGCATGAGA TAGGACATAA TTTCAATCTC GGAAATACCA GTTGGAACTG GAATGACGAA
ATGTTTGCCA ATTTCAGGGC ATATTATGCA GTTGAACAGC TGGAAAACTT GCACTTGAAC
AATATGGGCC CAATGCCTGT CGTTTACAAC TATCCTAATA TACGTCGGGA AGGTACTGAG
CTTAAAGATT ACTATTCTGA GAGGTATAAC GAAACCATGG CACAAGGAGA ATTTCATCAT
GACGGATTAA TGTACACACT CATTCTAGCT AAAGAAAAAA TAGGCTGGGA GCCCTTCCTT
AAAACCATAC AATACTTGTC AAGCAACGAT TTCAGCAACA AAAACGACAT GGAAAAATTT
GAACTCTTTT ATTCCAAACT GTCTGAATAT TCACAACAGC CAATAAGCGA ATTAATATCC
GACGAGGACA TGTCACTCGT CAGGGCATAC TGGAATGAGC ACGGTTCGTT ATTTACGCGT
TAA
|
|---|
| Protein sequence | MDFTASTTSV DIAVRLGYTN SKVTGTAWFD NITVEHLPKT VFTEDFENGL SSNWEIRSSK
HGNSLATVTV ESGTGVNNSK CLKISSLAQD EDVGCVKTLQ LAPNSYYKLS ALMKYENVTP
GKSDGANICL YNNEGEDAIW IRTATATGTN TSWELVKLLF KTPDSGSVNI GLRLGFLNCE
TKGTVWFDNV KVEAVPSDYI YESEHIIACF ETDDTQFATR EGILNWLSEL DKVYVLMKEF
SGNRVPFDGK KMGILSSDSH SGGVGAYAGD PIMWFKSAND NPVAYQLKMT CEHGDLSFAI
LHEIGHNFNL GNTSWNWNDE MFANFRAYYA VEQLENLHLN NMGPMPVVYN YPNIRREGTE
LKDYYSERYN ETMAQGEFHH DGLMYTLILA KEKIGWEPFL KTIQYLSSND FSNKNDMEKF
ELFYSKLSEY SQQPISELIS DEDMSLVRAY WNEHGSLFTR
|
|---|
| |