7 homologs were found in PanDaTox collection
for query gene Cpin_1499 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_1499  hypothetical protein  100 
 
 		 324 aa  680    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_3303  hypothetical protein  31.61 
 
 		 251 aa  91.7  1e-17  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.505416 
 
 
-
 
NC_009441  Fjoh_1275  ECF subfamily RNA polymerase sigma-24 factor  32.67 
 
 		 194 aa  67  0.0000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.457137  n/a   
 
 
-
 
NC_013061  Phep_3304  RNA polymerase sigma factor, sigma-70 family  33.33 
 
 		 189 aa  67  0.0000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.45944 
 
 
-
 
NC_009441  Fjoh_1276  hypothetical protein  23.89 
 
 		 240 aa  55.1  0.000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.13039  n/a   
 
 
-
 
NC_010803  Clim_1796  Tetratricopeptide TPR_2 repeat protein  32.26 
 
 		 465 aa  45.4  0.001  Chlorobium limicola DSM 245  Bacteria  normal  0.769841  n/a   
 
 
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NC_008255  CHU_0953  RNA polymerase, sigma-E factor; heat shock and oxidative stress  26.89 
 
 		 179 aa  43.1  0.006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0370429  normal  1 
 
 
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