| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3304 |
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| Symbol | |
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| ID | 8254423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3914378 |
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| End bp | 3914947 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644936956 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003093560 |
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| Protein GI | 255533188 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.45944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC ACATACATTC AGATCAGCGT TACGTTACCG GCCTGGTAAA TAATGATACG
GTAATAATTA ACGAGATCTA TAAGCGTTGT GCCGGAAAAA TAAAGTCATG GATCGTTTTT
AATAATGGCA GCGAAGACGA TGCAGCAGAT GTTTTCCAGG AAGCCCTGAT GGATGTTTAC
CGGCAGGCCA AATACAAATC GCTTGAACTG ACCTGCCCGT TTGAACCTTA CATTTTATTG
ATCTGCAAAC GTAAATGGTT AAATGAAATA AAAAAAAGAT CAATTCTACC GGTAACAAAT
CAGGAAGAGG ATTTATTACA TATCGGAGAA GATACTTTTG CAAATGCAGA TGAACTGGAA
AATCAGGAAG CGCAATCCAA ATTATTTTTC AACGCCTTTG AAAAATTAGG TGAACGCTGC
AAAGAAATCA TTTCATGGAG CATGAAGGGC GAGGCACAGG AAAAAGTAGC CGAAGCACTT
GGTGTTACCT ATGGTTACCT GAGAAAAAAG AAGTCTGAAT GCATGGCATC TCTGATAAAA
ATGGTTCAAT CAAATAAAAC GGAAGAATGA
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| Protein sequence | MAKHIHSDQR YVTGLVNNDT VIINEIYKRC AGKIKSWIVF NNGSEDDAAD VFQEALMDVY
RQAKYKSLEL TCPFEPYILL ICKRKWLNEI KKRSILPVTN QEEDLLHIGE DTFANADELE
NQEAQSKLFF NAFEKLGERC KEIISWSMKG EAQEKVAEAL GVTYGYLRKK KSECMASLIK
MVQSNKTEE
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