| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0953 |
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| Symbol | rpoE |
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| ID | 4184929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1100780 |
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| End bp | 1101319 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638070950 |
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| Product | RNA polymerase, sigma-E factor; heat shock and oxidative stress |
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| Protein accession | YP_677570 |
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| Protein GI | 110637363 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0370429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC AAGAGATTTT AGCGCGTCTA AAACAGGGTG ATGAGAATAC CTTGGACTTA
CTCTATAAAA AAAATTACCG GATGATGGTC AAACTGATCG TCAAAAACAA CGGTAGTGAA
GAGGAAGCCA AAGATGTTTA TCAGGATTCA TTGATTGTAC TTTGGCAAAA GGCTCGCGAC
CCTGATTTTG TATTAACTTC AAAAATAAGC ACTTACCTAT ACAGTATTTG TTTAAATTTG
TGGCGAAAAG AATTAGAACG TAAGAAACGT TTTTCTTATG AGGTTAAAGA TGAAGTTGAC
GTCGTTGACC TGGATAAAAA TGAACGCATT AAAATAATAA ATAAATGTAT TCAGCAATTG
GGTGAAACCT GCCGGGATAT TCTTACTTAT TATTATTTTG ATCGCTTGTC GATGGTTGAG
ATAGCCGAAA AGATGGGTTT TGCCAATTCG GACACTTCGA AAACAAAAAA ATACAAATGT
AAAAAGGAGC TGGATCTCCT TGTTAAATCT TTATATAAAG AAAGTGACTT TCTTGACTAG
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| Protein sequence | MNDQEILARL KQGDENTLDL LYKKNYRMMV KLIVKNNGSE EEAKDVYQDS LIVLWQKARD
PDFVLTSKIS TYLYSICLNL WRKELERKKR FSYEVKDEVD VVDLDKNERI KIINKCIQQL
GETCRDILTY YYFDRLSMVE IAEKMGFANS DTSKTKKYKC KKELDLLVKS LYKESDFLD
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