8 homologs were found in PanDaTox collection
for query gene Cpin_0567 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_0567  hypothetical protein  100 
 
 
534 aa  1091    Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4435  hypothetical protein  36.35 
 
 
566 aa  329  7e-89  Flavobacterium johnsoniae UW101  Bacteria  normal  0.176505  n/a   
 
 
-
 
NC_009441  Fjoh_4332  hypothetical protein  38.87 
 
 
532 aa  320  3.9999999999999996e-86  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4415  hypothetical protein  31.04 
 
 
536 aa  286  8e-76  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.392381  normal 
 
 
-
 
NC_013162  Coch_0442  hypothetical protein  30.63 
 
 
543 aa  237  4e-61  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0927  hypothetical protein  30.56 
 
 
538 aa  227  3e-58  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000176601  n/a   
 
 
-
 
NC_009441  Fjoh_3390  hypothetical protein  29.62 
 
 
556 aa  212  1e-53  Flavobacterium johnsoniae UW101  Bacteria  normal  0.338278  n/a   
 
 
-
 
NC_008700  Sama_1259  TPR domain-containing protein  40.38 
 
 
416 aa  43.5  0.009  Shewanella amazonensis SB2B  Bacteria  normal  0.644496  hitchhiker  0.000203167 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>