Gene Cpin_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0567 
Symbol 
ID8356673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp693845 
End bp695449 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content42% 
IMG OID644962713 
Producthypothetical protein 
Protein accessionYP_003120266 
Protein GI256419613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA AGCTTATTTG TTTGTTATTG CTGTTTGCGT GTAAAATATC ATTTGCCGGA 
TCCTCCCGGG ATACTTTATT GGACAGGCTG AATCAGACAA TTGAAAATGC ACACGTTTAT
GATGCGGACA GGGTTAAGCA GATCAATGTC CTGAGACAGG CATTGTCCAC CAGCAGACAC
CTGTCTACAG AAGAACAATT TAATATATGC CAGCAACTTT ACGAACAATT CAAGGTTTTT
AAATATGACT CGGCTTTTGC CTATGCCCGG AAATTACAGG AGCTGGCAAA GCAAATGAAT
GATTCTCAAC GGGTAAACTA TGCCGTTGTT AAACTGGGGT TTGTACTGCT TTCTTCCGGC
ATGTTCCGGG AGGCGGGCGA CTATCTGCTG ACTGTCAACG TTCATTCACT GCCTGACACC
GCACGTGCTG AATACTACTC CCTGATGGGG CGTTATTACT ATGACATGTC TGATTATAGC
AGCGATACCT ACTTCGCCCC TTCCTATACC CGGCAGGGAA ATATCTACAT AGATTCTGCA
CTGATGCTAT ATAAACCTCA TTCCTTTAAC TATGACTATA GTTATGGATT AATGTATCAG
AAAAAGCAGA TGCTGGATAG TGCGAAGCAC TATTACACCC TTACGGTAGC CCATCAGGAC
CTGACCATGC ATCAACAGGC GATTGCTACT TCCTCGCTTG GTAATATATA TATACGTATA
GGCAAACAGG ACAGTGCTAT TATTATGATG ACCCGGGCGG CAATGGCGGA TATTATGTCC
AGTACCAAAG AAACAACGGC CATGTTTATC CTGGCCGAAC TGCTGTTTAA GGAACGTGAT
GTAAAACATG CCTCCCGTTA TATAGAATAT GCGGTTGCGG ATGCCTCTTT TTATGGCGCC
CGGCTCAGAA AAGTGCAGGT AAGCGCCATA CTACCTATCA TTGAGGTGGA GAAGATCAAT
ACGGTGGAAG CACAGAAAAC GCTGCTATTC GTTTACTCGG CTATCGCTAC CTTATTATTA
CTGGCACTCA TCTGGCTGGC TGTAATCATC TTCCGGCAGT ATAAAAAGTT GCAGGCGGCT
CAGCAGGTCA TTACTTCCGC CCATGCATTG CAGCAGGAAA TCAATTATAA GTTGATGGAG
GCGAATAAGA TTAAAGAGGA ATATATCGGC TATTGTTTTC AGATCAACTC TTCTTACCTC
GACAAAATCA AAAAATTCAA AAAGCTGGCT GATCAGAAAC TGACTGATAA TAAATATGCC
GAAGTCAGGT ATCTGGTGAA TAACATCGAC CTTAAAGAGG AAAGAGATGA ATTGTTCCGT
AATTTTGACC GTATCTTCCT GAAGATATTT CCCAACTTTG TAACGGTCTT TAACTCCTTC
TTTAAAGAAG AGGATAGGAT CAAACTAAAA GACAACGAAC TACTAAATAC CGATCTCAGG
ATTTTCGCAC TGATCAGGAT CGGAATCAGT GACAATGTAA AAATTGCCCA GATTCTTGAA
TATTCAGTGA ACACTATTTA CACTTACAAA ACGAAGATCA AAAACAAGGC AATTATACCA
AAAGATGAGT TTGAAGAGCG ACTCATGGAT ATTAAAGCCC TCTGA
 
Protein sequence
MKSKLICLLL LFACKISFAG SSRDTLLDRL NQTIENAHVY DADRVKQINV LRQALSTSRH 
LSTEEQFNIC QQLYEQFKVF KYDSAFAYAR KLQELAKQMN DSQRVNYAVV KLGFVLLSSG
MFREAGDYLL TVNVHSLPDT ARAEYYSLMG RYYYDMSDYS SDTYFAPSYT RQGNIYIDSA
LMLYKPHSFN YDYSYGLMYQ KKQMLDSAKH YYTLTVAHQD LTMHQQAIAT SSLGNIYIRI
GKQDSAIIMM TRAAMADIMS STKETTAMFI LAELLFKERD VKHASRYIEY AVADASFYGA
RLRKVQVSAI LPIIEVEKIN TVEAQKTLLF VYSAIATLLL LALIWLAVII FRQYKKLQAA
QQVITSAHAL QQEINYKLME ANKIKEEYIG YCFQINSSYL DKIKKFKKLA DQKLTDNKYA
EVRYLVNNID LKEERDELFR NFDRIFLKIF PNFVTVFNSF FKEEDRIKLK DNELLNTDLR
IFALIRIGIS DNVKIAQILE YSVNTIYTYK TKIKNKAIIP KDEFEERLMD IKAL