| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1259 |
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| Symbol | |
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| ID | 4603511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1546403 |
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| End bp | 1547653 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780609 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_927136 |
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| Protein GI | 119774396 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.644496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000203167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCAAG TTAAACTTGC CAGCGCTTTG CTGCTGTCCT TGACTGCCGG TGCCCTGGTC
ATGCCAGTGG CACAGGCCGC CGAAAAATGT CCGATGGAAA AGCGTCAGTC ACGTGCGGTT
GGCGAGACGG TAGGTAAGAA GGTCCAAAAG TCCTTTGAAG CTTACACCAA TGGCCAAGTC
GACGAGGCGA TCGCCATTTT GCTTGAAGCC AATGCCAAAG GCGACTTCGA CAAGGCGTAT
GTTGCCCGCA TGCTGGGTAA CTTCTATGCC GAGAAAGGCA AAATGGATAC AGCCATCAAG
TACATGAAAC AGGCCGTTGA GGCTGATGTA CTGGGCGGTA CTGACCATGC GGCTTCCATG
AAGTTGTACG CCGATCTGCT CATCCAGGAG AAGAAGTGGA AAGAGGCAAT CGCCGTTTAC
TATAAGTGGA TGGACTTTGC CTGTAAGACT GATGATCCTG TGGTTTATCG TCGTATCGGT
ATTGCCTACA GCGAACTCAA GCAGTGGGAT AAGGTATTGG AAGTGGCAGA CCAAGGTCTG
TCGCACGCCA AGGAGCCGGA CAAAAACCTG TACCAGATGA AGCTGACTGC TTACTTCGAG
AAGAAGCAGT ACAAGAACGC TGTCAAGGTA CTGGAAACCA TGGTTCCCCT GTTCCAGGAC
GACAAGCGTT TGTGGATCCA GCTGGCACAG TTCTACCTGC TGACCGAAGA CTTCCCCCGC
TCATTGCAGA CTTATGACCT GAGTTACCGC AATGGCTTCC TGAAGGAAGA TGCAGGCAGT
TTGGTCCGCT ACTCTCAGCT GTTGGCGAGC CAGGGCTCTC CTTATCGTGC CGCCACCATC
ATGGAGAAAT TCATGAAGGC AGGTGTGATT GAGTCCAACG CCAAGCACTA CGAGCAGCTC
GCAGGCTTTT TCCAGAACTC CAAAGAGATC GAAAAAGCAG CTGAATACTA CGGTAAAGCG
GCAGAAGAAA AGAAAGACGG TAAGCTGTTC CTCAAGCAGG GACGCATGTT GGCACTGGCT
GAGAAATATT CTGCAGCCGT TCCAGCTCTG GAGAAATCTC TGGATGCCGG CATTCCCAAC
CCAGGCGAAG CGCACTTTGA GCTGGCGTTG ATTCATCTGC AACTGAAACA GTATAAGTCT
GCTTACTCAC GGGCTAAGCT GGCCGCTCAG GACAAGAAAA CTGAGCGCAG TGCCAAGAGC
TACATCTCTT ATATTCAAGA GAAAGCACGC ATCAACAACG TGACGCTCTA A
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| Protein sequence | MRQVKLASAL LLSLTAGALV MPVAQAAEKC PMEKRQSRAV GETVGKKVQK SFEAYTNGQV
DEAIAILLEA NAKGDFDKAY VARMLGNFYA EKGKMDTAIK YMKQAVEADV LGGTDHAASM
KLYADLLIQE KKWKEAIAVY YKWMDFACKT DDPVVYRRIG IAYSELKQWD KVLEVADQGL
SHAKEPDKNL YQMKLTAYFE KKQYKNAVKV LETMVPLFQD DKRLWIQLAQ FYLLTEDFPR
SLQTYDLSYR NGFLKEDAGS LVRYSQLLAS QGSPYRAATI MEKFMKAGVI ESNAKHYEQL
AGFFQNSKEI EKAAEYYGKA AEEKKDGKLF LKQGRMLALA EKYSAAVPAL EKSLDAGIPN
PGEAHFELAL IHLQLKQYKS AYSRAKLAAQ DKKTERSAKS YISYIQEKAR INNVTL
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