7 homologs were found in PanDaTox collection
for query gene Coch_0686 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_0686  type II restriction endonuclease TdeIII  100 
 
 
257 aa  538  9.999999999999999e-153  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0333  type II restriction endonuclease TdeIII  72.37 
 
 
260 aa  384  1e-106  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0268952  n/a   
 
 
-
 
NC_002967  TDE0911  type II restriction endonuclease TdeIII  68.11 
 
 
258 aa  353  1e-96  Treponema denticola ATCC 35405  Bacteria  normal  0.436049  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1726  type II restriction endonuclease TdeIII  54.09 
 
 
261 aa  252  3e-66  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000220311  n/a   
 
 
-
 
NC_013161  Cyan8802_4357  hypothetical protein  25 
 
 
280 aa  56.2  0.0000006  Cyanothece sp. PCC 8802  Bacteria  normal  0.0257657  normal  0.167684 
 
 
-
 
NC_008261  CPF_0140  putative type II restriction endonuclease  24.12 
 
 
274 aa  49.7  0.00005  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.000000224977  n/a   
 
 
-
 
NC_012790  GWCH70_3473  type II restriction endonuclease, putative  26.27 
 
 
268 aa  48.1  0.0001  Geobacillus sp. WCH70  Bacteria  unclonable  0.0000000242117  n/a   
 
 
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