Gene Cag_0333 details

Gene Information

• Locus tag: Cag_0333
• ID: 3748053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 372668
• End bp: 373450
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637772860
• Product: type II restriction endonuclease TdeIII
• Protein accession: YP_378649
• Protein GI: 78188311

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0268952
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAA ATCAACAACA AATACAGAAA GTAGAAACCG TTTTACGAAA CAGTTTAAGA 
CATAAATTTC AGAACTATAA TCCTGAACCA GCAGTTATGC CTTTTCATAC TCGTTTGTTG 
GGTAAAGATC GTATGGCTCT TTTTTCATTT ATTCATTCTT TGAATACTAA TTTTGGTACT 
ACGATTTTTG AGCCTGTTGC TCAAGCTTTA GCTTTATCAC GATTTGGTTC AGTTGAATTA 
CAGAAAGTTG CTGGAAATCA AATTTCATTA CAAGCCCAGC AAGTTATTCA GGAAATAATG 
GATGGACTAA CAACAGCAAC CAATTTGCCA TGTAAATCGC AAGAAATTGA GGCAATTCGA 
GCAGTTTGTC AAAGTGGAGA AATGCGTAAA GTTAAACCAA CAAAAGTAGA TGTAAAATTA 
ATTTCTTATG ACGGTACTCT TTTTCTGATT GATATAAAAA CAGCAAAACC AAATAAAGGT 
GGTTTTCAAG AATTTAAACG AACATTGCTT GAATGGGTTG CTGTTACATT GGCTACAAAT 
CCAGAAGCAA CTATTGAAAC GTTTATTGCT ATTCCTTACA ATCCATATGA GCCAAAACCA 
TATAGCAGAT GGACAATGCG TGGTATGTTA GACCTTGAAG CTGAGCTAAA AGTTGCCGAA 
GAGTTTTGGG ATTTTCTTGG TGGCGAGGGT ACGTATCCGC AATTGCTTGA TTGCTTTGAG 
CGCGTTGGTT GCGAGTTGCG TTCTGAAATT GATGCTTATT TTGCTCAATA TATTAATTCA 
TAG 

 

Protein sequence

MSLNQQQIQK VETVLRNSLR HKFQNYNPEP AVMPFHTRLL GKDRMALFSF IHSLNTNFGT 
TIFEPVAQAL ALSRFGSVEL QKVAGNQISL QAQQVIQEIM DGLTTATNLP CKSQEIEAIR 
AVCQSGEMRK VKPTKVDVKL ISYDGTLFLI DIKTAKPNKG GFQEFKRTLL EWVAVTLATN 
PEATIETFIA IPYNPYEPKP YSRWTMRGML DLEAELKVAE EFWDFLGGEG TYPQLLDCFE 
RVGCELRSEI DAYFAQYINS