Gene Coch_0686 details

Gene Information

• Locus tag: Coch_0686
• ID: 8367103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 841005
• End bp: 841778
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 644983113
• Product: type II restriction endonuclease TdeIII
• Protein accession: YP_003140805
• Protein GI: 256819526

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAACCC CACAACAAAT AGCTAATGTA GAAAACACAC TTAGGCATAG TCTTAGAACA 
AAGTTTCAGC ACTATAACCC TGAGCCTGCG GTAATGCCTT TCCATACACG CTTATTGGGT 
AAAGACCGTA TGGCACTGTT TTCGTTTATT CATTCTTTGA ATACTAATTT TGGGACGAGC 
ATTTTTGAGC CTGTAGCTAA ATCATTAGCT GAATCTCGGT TTAAGGTTGC TAAACTACAA 
GCGGTAGCTG GTGATAAAAT AAGTGAAAAA GCGGAACGGG TTATTCAAGA TATTATGGAT 
AATCTCACCG TAAATGGTAA CCCTAATAAG ACAGATGAAA TAGAAGCTAT TAGAGCTGTT 
TGCCAAGAAG GAAAAATGAA CACCGTAAAG CCTACCAAAG TAGATGTATG GTTAGAAAGT 
CATTCAGATG AGCTTTTCTT GTTTGACATT AAAACAGCTA AGCCTAACAA AGGAGGCTTT 
AAAGAGTTTA AACGCACTTT ATTAGAGTGG GTGGGTTGTG TATTGGCAGA AAACCCTAAC 
AGAAAAATAC ATACCCTTAT TGCTATACCT TACAATCCGT ATGAGCCTAA GCCCTATTCA 
CGTTGGACGA TGGCGGGAAT GTTAGATTTA GATAACGAGC TAAAAGTAGC CCAAGAGTTT 
TGGGATTTTC TCGCAGGAGA GAATGCCTAT CAGGATTTGT TAGATTGCTT TGAACGTGTA 
GGGATAGAGT TACATAATGA AATTGATGAA TATTTTAAAA AATTTAATAA CTAA 

 

Protein sequence

MLTPQQIANV ENTLRHSLRT KFQHYNPEPA VMPFHTRLLG KDRMALFSFI HSLNTNFGTS 
IFEPVAKSLA ESRFKVAKLQ AVAGDKISEK AERVIQDIMD NLTVNGNPNK TDEIEAIRAV 
CQEGKMNTVK PTKVDVWLES HSDELFLFDI KTAKPNKGGF KEFKRTLLEW VGCVLAENPN 
RKIHTLIAIP YNPYEPKPYS RWTMAGMLDL DNELKVAQEF WDFLAGENAY QDLLDCFERV 
GIELHNEIDE YFKKFNN