Gene TDE0911 details

Gene Information

• Locus tag: TDE0911
• Symbol: tdeIIIR
• ID: 2739951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 930613
• End bp: 931389
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637159785
• Product: type II restriction endonuclease TdeIII
• Protein accession: NP_971521
• Protein GI: 42526423

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.436049
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACTAT CTAATCAACA AATAATACAG GTCGAAGATA TTTTAAAACA AAGCTTACGA 
CATAAATTTC AAAATTATAA TCCCGAACCT GCCGTAATGC CTTTTCATAC CCGCTTGTTA 
GGAAAAGATA GAATGGCATT GTTTTCGTTT ATTCATTCCC TAAATACGAA TTTTGGTACA 
ACTATTTTTG AACCGGTAGC GGTTGCTCTT GCAAAAACAA CATTTAAAAG CGCTGAAAAG 
CAACAAACAG CCGGAAAAAC TATTTCAAGT GAAGCGCAAA ATGTCATTCA AACCATTATG 
GATGACCTTA CAACCGGACG GCAGCTACCG GATAAGATTC AAGAAATCGA AAGGATACGT 
GCAGTATGTC AAAAAGGGGA AATGAAAGAA GTAAAACCGA CGAAGGTTGA TGTGAAACTT 
GTTTCAAAGA ATGATGAAAT GTTTCTTATT GATATAAAAT CGGCAAAACC GAATATCGGT 
GAATTTAAAG GATTTAAACG TACCCTTTTA GAATGGGTTG CGGTAACACT TGCCGAACAT 
CCGAAAGCTC ATATCCATAC ATTTCTTGCA ATTCCGTATA ATCCGTATGA ACCGAAAGAA 
TACAGCCGCT GGACAATGCG AGGGATGATT GATTTGGAAT ATGAGCTAAA AGTTGCGGCA 
GAATTTTGGG ACTTTTTAGG CGGCACCGGA TTATACGAAG CATTGTTGAA TATTTTTGAG 
AAAGTCGGAA TTGAACTGCG TCCAGAAATC GATGCCTATT TTGCACAGCA TAGATAG 

 

Protein sequence

MSLSNQQIIQ VEDILKQSLR HKFQNYNPEP AVMPFHTRLL GKDRMALFSF IHSLNTNFGT 
TIFEPVAVAL AKTTFKSAEK QQTAGKTISS EAQNVIQTIM DDLTTGRQLP DKIQEIERIR 
AVCQKGEMKE VKPTKVDVKL VSKNDEMFLI DIKSAKPNIG EFKGFKRTLL EWVAVTLAEH 
PKAHIHTFLA IPYNPYEPKE YSRWTMRGMI DLEYELKVAA EFWDFLGGTG LYEALLNIFE 
KVGIELRPEI DAYFAQHR