9 homologs were found in PanDaTox collection
for query gene Clim_1898 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010803  Clim_1898  hypothetical protein  100 
 
 
364 aa  752    Chlorobium limicola DSM 245  Bacteria  normal  0.521574  n/a   
 
 
-
 
NC_010803  Clim_1896  hypothetical protein  37.05 
 
 
363 aa  207  2e-52  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2831  hypothetical protein  34.16 
 
 
271 aa  135  1.9999999999999998e-30  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000150593  n/a   
 
 
-
 
NC_009338  Mflv_4766  hypothetical protein  29.66 
 
 
285 aa  88.2  2e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0040  hypothetical protein  25.61 
 
 
289 aa  65.5  0.000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4943  hypothetical protein  26.44 
 
 
298 aa  52.4  0.00001  Cyanothece sp. PCC 7425  Bacteria  normal  0.465908  normal 
 
 
-
 
NC_011146  Gbem_3737  hypothetical protein  23.75 
 
 
349 aa  50.4  0.00004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0417  hypothetical protein  25.4 
 
 
288 aa  50.4  0.00005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.457382 
 
 
-
 
NC_013730  Slin_4260  hypothetical protein  23.38 
 
 
301 aa  45.1  0.002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.221119 
 
 
-
 
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