Gene Slin_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4260 
Symbol 
ID8728019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5142514 
End bp5143419 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389043 
Protein GI284039113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.221119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAG CTGCGTTTAA TTCCATAAGT CAATTTCTGA GCGACTTTGT CGCATCCCTG 
GTATCGCTGG CAAAAGTGGC TATCCGTATC CGGCACGCTA CTCGCCTGCC CAATCCGCAG
GTACCGGTTT GCTCGGTGCT GGGGAACGGT CCCTCCCTGA CAGAGTCGCT GGCGACACAA
TTCGATTTTA TCCGGCAAAC CGAGATTGTC TGCGTCAATA ACTTCGCCCA TGCCGAGGCT
TTCATCCAGC TTCGCCCGCA GGATTACGTA ATCCTGGACC CTAACTATTT CGTTTTCAAC
GAACATACCA CCGACCGCGA CGATATCCGG AAAACACTCT CGGTATTCCT GGAAAAGGTC
GACTGGCCCA TGACACTGTT CGTTCCGCAT TTTGCCAAAG GGACGTACCT GCTCGGTAAA
ATCGAGCAGG GCAACCCGCT GATCACCGTC GTTTACTTCA ACTACACGGT TCTTCGTGGG
TTCAAAAGGT TAATCTACTG GCTTTATGCC AAAGGGTTCG GTATGCCGCA GGCCCAAACC
GTCATTATTG CGGCCCTGGC CCTGATGATC AACCGAAAGT TCAAAACAAT TTATCTATTC
GGTGCGGATA CGTCCTGGCA TGAGCAAATC CGTCTGAATG ATCAAAATCA ACTCTTGATC
AAGCAGATCC ATTTTTACGA CAAGCCGAAA GATCTTACGC ACCAACCGGT GTATCTGGAT
GCCCAGCGGC AGCGCACGTT TTCGATGGCC GCGCAGTTTC TCTCGCTACA CAAGGCCTTT
CGCGGGTATG AAGTGCTGCG TGACTACGCC GATTACCGGG GAGTTCAGAT CATAAATGCC
AGTGCCAAAA GTTATATTGA CGCCTTTGAG CGGCAAGCCA CCAGCGAGTC AGTCACGAAC
GAGTAG
 
Protein sequence
MVEAAFNSIS QFLSDFVASL VSLAKVAIRI RHATRLPNPQ VPVCSVLGNG PSLTESLATQ 
FDFIRQTEIV CVNNFAHAEA FIQLRPQDYV ILDPNYFVFN EHTTDRDDIR KTLSVFLEKV
DWPMTLFVPH FAKGTYLLGK IEQGNPLITV VYFNYTVLRG FKRLIYWLYA KGFGMPQAQT
VIIAALALMI NRKFKTIYLF GADTSWHEQI RLNDQNQLLI KQIHFYDKPK DLTHQPVYLD
AQRQRTFSMA AQFLSLHKAF RGYEVLRDYA DYRGVQIINA SAKSYIDAFE RQATSESVTN
E