Gene Sfri_2831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2831 
Symbol 
ID4279736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3412382 
End bp3413197 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content32% 
IMG OID638135649 
Producthypothetical protein 
Protein accessionYP_751509 
Protein GI114563995 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000150593 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTCAA ATCGAGTAAA AGAGCATGTA AAGTCATTGA TTTACAACAA TAAGTCCTTA 
TACAGCCTTT ATGATAAAGG TTTTTCTTAT GGTTGCAGCG ATTTTAGTAA ATTAAAAGAT
AAATTCAAAG GTGAGCGAGC TTTTATTGTC GGTAATGGTC CATCATTAAA TAAACATGAT
TTATCCCTTT TGAAGAATGA GTATTCGTTT GCTGTAAATG GTATTTTCTA CAAAACAGAA
AGTGAAGGAT TTAGACCTAC TTTTTATGTT GTTGAAGACC GTCATGTAAT GTTGGATAAT
GTCGATAAAA TTAATACTTT CGAAGCACAG TATAAGTTTT TTCCAATAGA TTACAAAAAT
CAAGTTAAAA ATAAGAAAAA TTGTTGGTTT TTTCGAATGG ACAAAGGATA TTACAACAAA
ACCAGCCCTT ACTTTGCAAT ACCAAGATTT TCAACTGATA TGAATGACAA GTTGTATTGT
GGTCAGAGTG TAACAATGAT CAACTTACAA ATTGCATATT ATTTGGGGTT TAGTGAAATA
TATTTAATTG GAATGGATCA TTCTTATCAA ATTCCAAGTG ACGCTGATGT CGCTGGTGAA
GAGATTACTT CTAATTCAGA CGATCCTAAT CATTTTCATC CAGATTATTT TGGTAAAGGA
AAGAAGTGGC ATGATCCGCA TTTAGATAGA GTAGAAAGAA CCTATTCGTA TTTTAAGCTA
GTATATGAAT CGCAAGAAAG ACAAGTTTAC AATGCCACAG TTGGTGGCAG CTTAGAAGTT
TTCGATAGAG CTGACTATTA CAGCTTGTTT AAATAA
 
Protein sequence
MNSNRVKEHV KSLIYNNKSL YSLYDKGFSY GCSDFSKLKD KFKGERAFIV GNGPSLNKHD 
LSLLKNEYSF AVNGIFYKTE SEGFRPTFYV VEDRHVMLDN VDKINTFEAQ YKFFPIDYKN
QVKNKKNCWF FRMDKGYYNK TSPYFAIPRF STDMNDKLYC GQSVTMINLQ IAYYLGFSEI
YLIGMDHSYQ IPSDADVAGE EITSNSDDPN HFHPDYFGKG KKWHDPHLDR VERTYSYFKL
VYESQERQVY NATVGGSLEV FDRADYYSLF K