Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2831 |
Symbol | |
ID | 4279736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3412382 |
End bp | 3413197 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638135649 |
Product | hypothetical protein |
Protein accession | YP_751509 |
Protein GI | 114563995 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000150593 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTCAA ATCGAGTAAA AGAGCATGTA AAGTCATTGA TTTACAACAA TAAGTCCTTA TACAGCCTTT ATGATAAAGG TTTTTCTTAT GGTTGCAGCG ATTTTAGTAA ATTAAAAGAT AAATTCAAAG GTGAGCGAGC TTTTATTGTC GGTAATGGTC CATCATTAAA TAAACATGAT TTATCCCTTT TGAAGAATGA GTATTCGTTT GCTGTAAATG GTATTTTCTA CAAAACAGAA AGTGAAGGAT TTAGACCTAC TTTTTATGTT GTTGAAGACC GTCATGTAAT GTTGGATAAT GTCGATAAAA TTAATACTTT CGAAGCACAG TATAAGTTTT TTCCAATAGA TTACAAAAAT CAAGTTAAAA ATAAGAAAAA TTGTTGGTTT TTTCGAATGG ACAAAGGATA TTACAACAAA ACCAGCCCTT ACTTTGCAAT ACCAAGATTT TCAACTGATA TGAATGACAA GTTGTATTGT GGTCAGAGTG TAACAATGAT CAACTTACAA ATTGCATATT ATTTGGGGTT TAGTGAAATA TATTTAATTG GAATGGATCA TTCTTATCAA ATTCCAAGTG ACGCTGATGT CGCTGGTGAA GAGATTACTT CTAATTCAGA CGATCCTAAT CATTTTCATC CAGATTATTT TGGTAAAGGA AAGAAGTGGC ATGATCCGCA TTTAGATAGA GTAGAAAGAA CCTATTCGTA TTTTAAGCTA GTATATGAAT CGCAAGAAAG ACAAGTTTAC AATGCCACAG TTGGTGGCAG CTTAGAAGTT TTCGATAGAG CTGACTATTA CAGCTTGTTT AAATAA
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Protein sequence | MNSNRVKEHV KSLIYNNKSL YSLYDKGFSY GCSDFSKLKD KFKGERAFIV GNGPSLNKHD LSLLKNEYSF AVNGIFYKTE SEGFRPTFYV VEDRHVMLDN VDKINTFEAQ YKFFPIDYKN QVKNKKNCWF FRMDKGYYNK TSPYFAIPRF STDMNDKLYC GQSVTMINLQ IAYYLGFSEI YLIGMDHSYQ IPSDADVAGE EITSNSDDPN HFHPDYFGKG KKWHDPHLDR VERTYSYFKL VYESQERQVY NATVGGSLEV FDRADYYSLF K
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