8 homologs were found in PanDaTox collection
for query gene Cagg_R0054 on replicon NC_011831
Organism: Chloroflexus aggregans DSM 9485



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011831  Cagg_R0054  tRNA-Leu  100 
 
 
86 bp  170  3e-41  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000429153  normal  0.0864889 
 
 
-
 
NC_009523  RoseRS_R0039  tRNA-Leu  91.86 
 
 
86 bp  115  2.0000000000000002e-24  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00000240942  unclonable  0.0000109748 
 
 
-
 
NC_009767  Rcas_R0034  tRNA-Leu  91.86 
 
 
86 bp  115  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.333155  hitchhiker  0.000426709 
 
 
-
 
NC_014212  Mesil_R0029  tRNA-Leu  83.72 
 
 
86 bp  60  0.00000009  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.000810076  normal  0.622739 
 
 
-
 
NC_008261  CPF_1633  tRNA-Leu  96.55 
 
 
87 bp  50.1  0.00009  Clostridium perfringens ATCC 13124  Bacteria  normal  0.372837  n/a   
 
 
-
 
NC_008262  CPR_1372  tRNA-Leu  96.55 
 
 
87 bp  50.1  0.00009  Clostridium perfringens SM101  Bacteria  normal  0.169608  n/a   
 
 
-
 
NC_011662  Tmz1t_R0035  tRNA-Leu  93.75 
 
 
85 bp  48.1  0.0003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_R0045  tRNA-Leu  87.5 
 
 
88 bp  48.1  0.0003  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0092775  normal 
 
 
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