6 homologs were found in PanDaTox collection
for query gene CPS_0570 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_0570  putative lipoprotein  100 
 
 
338 aa  638    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0296  coagulation factor 5/8 type protein  31.91 
 
 
954 aa  73.2  0.000000000006  Shewanella amazonensis SB2B  Bacteria  normal  0.464689  normal 
 
 
-
 
NC_008228  Patl_0123  coagulation factor 5/8 type-like  29.21 
 
 
944 aa  60.5  0.00000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0757  hypothetical protein  33.73 
 
 
386 aa  45.1  0.002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00827619  n/a   
 
 
-
 
NC_009483  Gura_0768  hypothetical protein  33.73 
 
 
385 aa  45.1  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  0.855521  n/a   
 
 
-
 
NC_008781  Pnap_0059  hypothetical protein  33.07 
 
 
768 aa  44.3  0.003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0504917 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>