6 homologs were found in PanDaTox collection
for query gene CPF_0954 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_0954  hypothetical protein  100 
 
 
205 aa  402  1e-111  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1663  hypothetical protein  41.09 
 
 
238 aa  135  5e-31  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1934  hypothetical protein  24.14 
 
 
218 aa  49.3  0.00004  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000315052 
 
 
-
 
NC_013204  Elen_1513  hypothetical protein  21.8 
 
 
211 aa  43.1  0.003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.515753 
 
 
-
 
NC_009441  Fjoh_4370  hypothetical protein  28.57 
 
 
265 aa  42.7  0.004  Flavobacterium johnsoniae UW101  Bacteria  decreased coverage  0.00797888  n/a   
 
 
-
 
NC_007958  RPD_3943  hypothetical protein  21.21 
 
 
408 aa  42.4  0.005  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
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