7 homologs were found in PanDaTox collection
for query gene PP_1934 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1934  hypothetical protein  100 
 
 
218 aa  449  1e-125  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000315052 
 
 
-
 
NC_007484  Noc_0527  hypothetical protein  32.89 
 
 
215 aa  63.9  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0954  hypothetical protein  25.12 
 
 
205 aa  62.4  0.000000006  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1663  hypothetical protein  30.83 
 
 
238 aa  55.8  0.0000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0577  hypothetical protein  25.76 
 
 
145 aa  47.4  0.0002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1437  hypothetical protein  25.33 
 
 
402 aa  45.4  0.0006  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4370  hypothetical protein  19.51 
 
 
265 aa  43.1  0.003  Flavobacterium johnsoniae UW101  Bacteria  decreased coverage  0.00797888  n/a   
 
 
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