Gene CPF_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0954 
Symbol 
ID4201878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1107325 
End bp1107942 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content23% 
IMG OID638081836 
Producthypothetical protein 
Protein accessionYP_695401 
Protein GI110798762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAA AAGTATTTAT AGAAGGTAAA AATAAAAGTG AACAAGCTTA TATAGGTTGG 
GAGTCAGAAG AATTATACCT AATTGGAGTA AAGGATGGAT ATAAAAGTTC AGCTGATGAT 
CTTCTTGACA AAGCAATATT AGAAGGCCAT AAAAATAGAA TTGATATATT AGATAAATAT 
ATATTTCCAA TAATGTTCTT ATATAGACAT AGTATAGAAA TAAGCTTAAA ACTTATATAT 
AGAAGAGTTA ATGGAAAGAT ACCAACTGGA CATAATCTTA TGACATTATG GGATAGAGTT 
GACAAGGATG TTTTAAACCT TTTAAATAAT GATATTAAAT TAAAAAAGCT TGAAGAAAAA 
TATAATACTA AAATTTATAG ATTAAATATT GATAAAAAGT TATTAAATGA GATTAAAAAC 
TTGATAAAAG AATTACAAGG TATTGATTCT AATGGAGATG TTTGGAGATA TCTTATCAAT 
AAAAATGGAG ATTTATATTT TAATAAGTGG AAATTTATAG ATTATCCGAA TTTAAAAAAT 
ACTATTAATT ATATCTATGA GTTTTTAGAT GGTTTATATT GTGAAGTTGA TGAAATTCTA 
GTAGTAAGAA AGTCTTAG
 
Protein sequence
MERKVFIEGK NKSEQAYIGW ESEELYLIGV KDGYKSSADD LLDKAILEGH KNRIDILDKY 
IFPIMFLYRH SIEISLKLIY RRVNGKIPTG HNLMTLWDRV DKDVLNLLNN DIKLKKLEEK 
YNTKIYRLNI DKKLLNEIKN LIKELQGIDS NGDVWRYLIN KNGDLYFNKW KFIDYPNLKN 
TINYIYEFLD GLYCEVDEIL VVRKS