Gene RPD_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3943 
Symbol 
ID4024459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4387641 
End bp4388867 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content58% 
IMG OID637964147 
Producthypothetical protein 
Protein accessionYP_571065 
Protein GI91978406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG ATCCTTTTTT CGGCCTCTCG GGAGACAGCA CTTGGAACGC TTGTATTGGA 
CCGCAGGGCG ACGAACTCCA CTACGTTGAA GGCTACCTGG AAGCGGCGAT CGAACTCGCC
AACGCGGTGA TCGAGAAGAC CATGCTCGCC AAGCGCGATA CGCTCGTCCT CCCGATTCTG
TACAACGCAC GCCACGCCAT TGAACTCGTT CTGAAATTCG TGACTGCACA ATTGTTCGAT
TGCGGCATCA TCGCGGAGAA GCATCCCGCC AATCACGATA TCAAGGGGCA TTTTGATCAC
CTAGTCGCGG CCAACGTCCC CGACGAAACC ATACGTGACG GCCTGAAGAC GCTAGAACGT
TTCGTCGTCA GCCTCGACCG TATAGACGAT GATGGACAGG AATTGCGGTA CCACGTCAAT
CGCGATGGCG AGACGAGCCT GAAGGGAGAA TCTCTAGCCA ATATCGCCGT CATCCGCGGA
AGCCTCGACG AACTGTCGTC GGCCGTTACC GGATTGATGA ACCGGACGAT CGACTTGATC
CAAGAACGGA AAGCCGGCGC GTACACTCCC CGTTGCTCGC GCGCGGACCT CCGCGCAATA
GCCGGCATGA TGCCGCCGCT TGCCGAATGG GGCGGAGAAT CCTTCACTGC CGCGAAAGGC
GCGGTGAAGG AGCGTTTTGC GCTCAGCAAC ACGCAGTTCA GCAGGGCAAT CGATGCGATC
AAGGCGAACC GCGAATTAAA CGGGATGATC GGCGGCGAAA CCGAACTTCC GTGCCTCCTC
GACGAGGAAG TGATGCTCGT CGTCGAGCAA TGGCGCATTC TTCATCCCAA ACGCGAGGAG
AAAGAACCCG AAGTCGTCCA AGGGAAAAAC TTTAAGTTTG CAGATATGAT CAAGAGCATC
AAAAAGAGTC GCGAATGCGT CGCGGCCCTG AGCAAAACGA TAACTAGTCA TGAAGCCGCG
GACCTCGAAG CGCTCTTCTA TCTGGGTCGC GGAGATTTCT TTCCGGAGCA ATTGGAAGCT
CGGGCTGCGA CCTACCTGGG GTCCCTGGTC GACGACTCGG AGGTGCGGGC CCGCACCGCA
CAGCTATTGG AAAAGACGAA CCTTCTCGCC TGCCTGGAGC GAGGCGCGCG TCGGGCGGGG
CGACTTTCTC TCGCCGAGAA GCTAGGCACG GCGCCGGCCG AGTCGAACCC AGTACAGGAC
GGAGATTGCT CGAAGGTGGG GGAATGA
 
Protein sequence
MSEDPFFGLS GDSTWNACIG PQGDELHYVE GYLEAAIELA NAVIEKTMLA KRDTLVLPIL 
YNARHAIELV LKFVTAQLFD CGIIAEKHPA NHDIKGHFDH LVAANVPDET IRDGLKTLER
FVVSLDRIDD DGQELRYHVN RDGETSLKGE SLANIAVIRG SLDELSSAVT GLMNRTIDLI
QERKAGAYTP RCSRADLRAI AGMMPPLAEW GGESFTAAKG AVKERFALSN TQFSRAIDAI
KANRELNGMI GGETELPCLL DEEVMLVVEQ WRILHPKREE KEPEVVQGKN FKFADMIKSI
KKSRECVAAL SKTITSHEAA DLEALFYLGR GDFFPEQLEA RAATYLGSLV DDSEVRARTA
QLLEKTNLLA CLERGARRAG RLSLAEKLGT APAESNPVQD GDCSKVGE