8 homologs were found in PanDaTox collection
for query gene CNL04290 on replicon NC_006681
Organism: Cryptococcus neoformans var. neoformans JEC21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_006681  CNL04290  20 kda nuclear cap binding protein (ncbp), putative  100 
 
 
195 aa  388  1e-107  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.00480591  n/a   
 
 
-
 
BN001301  ANIA_06142  small subunit of nuclear cap-binding protein complex (AFU_orthologue; AFUA_2G08570)  52.99 
 
 
185 aa  149  3e-35  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.040408  normal  0.207556 
 
 
-
 
NC_009374  OSTLU_43898  predicted protein  59.13 
 
 
173 aa  139  1.9999999999999998e-32  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.00800465  normal 
 
 
-
 
NC_011679  PHATR_13520  predicted protein  53.15 
 
 
127 aa  110  2.0000000000000002e-23  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  hitchhiker  0.00556924  n/a   
 
 
-
 
NC_009068  PICST_37507  small subunit of the nuclear mRNA cap-binding protein complex CBC  49.5 
 
 
167 aa  101  8e-21  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.201062  normal  0.0819638 
 
 
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NC_006670  CNA04600  single-stranded DNA binding protein, putative  32.47 
 
 
441 aa  54.3  0.000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_013440  Hoch_6779  RNP-1 like RNA-binding protein  35.06 
 
 
207 aa  48.5  0.00005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.882388 
 
 
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BN001303  ANIA_04865  nucleolin protein Nsr1, putative (AFU_orthologue; AFUA_3G07710)  31.17 
 
 
524 aa  44.7  0.001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.046271 
 
 
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